Submissions from 2011
Modeling the negative feedback mechanism in the enzyme carboxyltransferase, Xiaoyu Cai, Marcio De Queiroz, Glen Meades, and Grover Waldrop
Efficacy of low-level laser therapy for body contouring and spot fat reduction, Mary K. Caruso-Davis, Thomas S. Guillot, Vinod K. Podichetty, Nazar Mashtalir, Nikhil V. Dhurandhar, Olga Dubuisson, Ying Yu, and Frank L. Greenway
Not so fast: A new take on the Great American biotic interchange, Prosanta Chakrabarty and James S. Albert
Is sexual selection driving diversification of the bioluminescent ponyfishes (Teleostei: Leiognathidae)?, Prosanta Chakrabarty, Matthew P. Davis, W. Leo Smith, Zachary H. Baldwin, and John S. Sparks
Evolution of the light organ system in ponyfishes (Teleostei: Leiognathidae), Prosanta Chakrabarty, Matthew P. Davis, Wm Leo Smith, Rachel Berquist, Kristen M. Gledhill, Larry R. Frank, and John S. Sparks
A spin-drying technique for lyopreservation of mammalian cells, Nilay Chakraborty, Anthony Chang, Heidi Elmoazzen, Michael A. Menze, Steven C. Hand, and Mehmet Toner
Cryopreservation of spin-dried mammalian cells, Nilay Chakraborty, Michael A. Menze, Jason Malsam, Alptekin Aksan, Steven C. Hand, and Mehmet Toner
Longitudinal assessment of cognitive and psychosocial functioning after Hurricanes Katrina and Rita: Exploring disaster impact on middle-aged, older, and oldest-old adults, Katie E. Cherry, Jennifer Silva Brown, Loren D. Marks, Sandro Galea, Julia Volaufova, Christina Lefante, L. Joseph Su, David A. Welsh, S. Michal Jazwinski, Meghan B. Allen, et al.
EFFECTS OF POSTMORTEM INTERVAL AND PRESERVATION METHOD ON RNA ISOLATED FROM FIELD-PRESERVED AVIAN TISSUES, Zachary A. Cheviron, Matthew D. Carling, and Robb T. Brumfield
NKS1, Na+- and K+-sensitive 1, regulates ion homeostasis in an SOS-independent pathway in Arabidopsis, Wonkyun Choi, Dongwon Baek, Dong Ha Oh, Jiyoung Park, Hyewon Hong, Woe Yeon Kim, Hans J. Bohnert, Ray A. Bressan, Hyeong Cheol Park, and Dae Jin Yun
Habitat specificity and diversity of tree species in an African wet tropical forest, George B. Chuyong, David Kenfack, Kyle E. Harms, Duncan W. Thomas, Richard Condit, and Liza S. Comita
Relationships among net primary productivity, nutrients and climate in tropical rain forest: A pan-tropical analysis, Cory C. Cleveland, Alan R. Townsend, Philip Taylor, Silvia Alvarez-Clare, Mercedes M.C. Bustamante, George Chuyong, Solomon Z. Dobrowski, Pauline Grierson, Kyle E. Harms, Benjamin Z. Houlton, et al.
Relationships among net primary productivity, nutrients and climate in tropical rain forest: A pan-tropical analysis, Cory C. Cleveland, Alan R. Townsend, Philip Taylor, Silvia Alvarez-Clare, Mercedes M.C. Bustamante, George Chuyong, Solomon Z. Dobrowski, Pauline Grierson, Kyle E. Harms, Benjamin Z. Houlton, et al.
Alu pair exclusions in the human genome, George W. Cook, Miriam K. Konkel, James D. Major, Jerilyn A. Walker, Kyudong Han, and Mark A. Batzer
Innate IL-13 in virus-induced asthma?, S. A. Cormier and J. K. Kolls
Investigating combinatorial approaches in virtual screening on human inducible 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB3): A case study for small molecule kinases, Robert B. Crochet, Michael C. Cavalier, Minsuh Seo, Jeong Do Kim, Young Sun Yim, Seung Jong Park, and Yong Hwan Lee
Spatial ecology of the palm-leaf skeletonizer, Homaledra sabelella (Lepidoptera: Coleophoridae), James T. Cronin
The genome of the extremophile crucifer Thellungiella parvula, Maheshi Dassanayake, Dong Ha Oh, Jeffrey S. Haas, Alvaro Hernandez, Hyewon Hong, Shahjahan Ali, Dae Jin Yun, Ray A. Bressan, Jian Kang Zhu, Hans J. Bohnert, et al.
Transcription strength and halophytic lifestyle, Maheshi Dassanayake, Dong ha Oh, Hyewon Hong, Hans J. Bohnert, and John M. Cheeseman
Tripodfish (Aulopiformes: Bathypterois) locomotion and landing behaviour from video observation at bathypelagic depths in the Campos Basin of Brazil, Matthew P. Davis and Prosanta Chakrabarty
Repetitive elements may comprise over Two-Thirds of the human genome, A. P.Jason de Koning, Wanjun Gu, Todd A. Castoe, Mark A. Batzer, and David D. Pollock
Lineage diversification and morphological evolution in a large-scale continental radiation: The neotropical ovenbirds and woodcreepers (aves: furnariidae), Elizabeth P. Derryberry, Santiago Claramunt, Graham Derryberry, R. Terry Chesser, Joel Cracraft, Alexandre Aleixo, Jorge Pérez-Emán, J. V. Remsen, and Robb T. Brumfield
E4orf1: a novel ligand that improves glucose disposal in cell culture, Emily J. Dhurandhar, Olga Dubuisson, Nazar Mashtalir, Rashmi Krishnapuram, Vijay Hegde, and Nikhil V. Dhurandhar
Virus-derived siRNAs and piRNAs in immunity and pathogenesis, Shou Wei Ding and Rui Lu
Influence of cortisol on the attachment and metamorphosis of larval Utterbackia imbecillis on bluegill sunfish (Lepomis macrochirus), Benjamin Dubansky, Brian Whitaker, and Fernando Galvez
Asynchronous oviductal seasonal variation in the unisexual-bisexual Nactus pelagicus complex from the Vanuatu Archipelago (Reptilia: Squamata: Gekkonidae), Mallory E. Eckstut, Alison M. Hamilton, Christopher C. Austin, and David M. Sever
Calcium promotes exopolysaccharide phase variation and biofilm formation of the resulting phase variants in the human pathogen Vibrio vulnificus, Katherine L. Garrison-Schilling, Brenda L. Grau, Kevin S. McCarter, Brett J. Olivier, Nicole E. Comeaux, and Gregg S. Pettis
The structure of human 5-lipoxygenase, Nathaniel C. Gilbert, Sue G. Bartlett, Maria T. Waight, David B. Neau, William E. Boeglin, Alan R. Brash, and Marcia E. Newcomer
Helminths from 9 species of geckos (Squamata: Gekkonidae) from Sri Lanka, Stephen R. Goldberg, Charles R. Bursey, Aaron M. Bauer, Anselm De Silva, and Christopher C. Austin
Gastrointestinal helminth communities of two gekkonid lizard species, Nactus multicarinatus and Nactus pelagicus (Squamata: Gekkonidae), from the Republic of Vanuatu, Oceania, Stephen R. Goldberg, Charles R. Bursey, Alison M. Hamilton, and Christopher C. Austin
Functional evolution of bacterial histone-like HU proteins, A. Grove
Environmental heterogeneity and spatiotemporal variability in plant defense traits, Alyssa S. Hakes and James T. Cronin
Resistance and tolerance to herbivory in Solidago altissima (Asteraceae): Genetic variability, costs, and selection for multiple traits, Alyssa S. Hakes and James T. Cronin
Metabolic restructuring during energy-limited states: Insights from Artemia franciscana embryos and other animals, Steven C. Hand, Michael A. Menze, Apu Borcar, Yuvraj Patil, Joseph A. Covi, Julie A. Reynolds, and Mehmet Toner
LEA proteins during water stress: Not just for plants anymore, Steven C. Hand, Michael A. Menze, Mehmet Toner, Leaf Boswell, and Daniel Moore
Structure and function of Nopp140 and treacle, Fang He and Patrick DiMario
Drosophila delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDh) is required for proline breakdown and mitochondrial integrity-Establishing a fly model for human type II hyperprolinemia, Fang He and Patrick J. DiMario
Equilibrium submanifold for a biological system, H. He and N. Kato
PRGMATIC: an efficient pipeline for collating genome-enriched second-generation sequencing data using a 'provisional-reference genome', Sarah M. Hird, Robb T. Brumfield, and Bryan C. Carstens
Microsatellites isolated from the North American ground skink (Scincella lateralis), Nathan D. Jackson, Travis C. Glenn, Cris Hagen, Stacey L. Lance, and Christopher C. Austin
Site-specific proteolytic cleavage of the amino terminus of herpes simplex virus glycoprotein K on virion particles inhibits virus entry, Nithya Jambunathan, Sona Chowdhury, Ramesh Subramanian, Vladimir N. Chouljenko, Jason D. Walker, and Konstantin G. Kousoulas
Crystal structure of plasminogen activator inhibitor-1 in an active conformation with normal thermodynamic stability, Jan K. Jensen, Lawrence C. Thompson, Joel C. Bucci, Poul Nissen, Peter G.W. Gettins, Cynthia B. Peterson, Peter A. Andreasen, and J. Preben Morth
Dma1 ubiquitinates the SIN scaffold, Sid4, to impede the mitotic localization of Plo1 kinase, Alyssa E. Johnson and Kathleen L. Gould
Decoding the genome with an integrative analysis tool: Combinatorial CRM Decoder, Keunsoo Kang, Joomyeong Kim, Jae Hoon Chung, and Daeyoup Lee
BRANCHLESS TRICHOMES links cell shape and cell cycle control in Arabidopsis trichomes, Remmy Kasili, Cho Chun Huang, Jason D. Walker, L. Alice Simmons, Jing Zhou, Chris Faulk, Martin Hülskamp, and John C. Larkin
Model Particulate Matter Containing Persistent Free Radicals Exhibit Reactive Oxygen Species Production, M. A. Kelley, T. Thibeaux, V. Y. Hebert, S. A. Cormier, S. Lomnicki, B. Dellinger, and T. R. Dugas
Aebp2 as an epigenetic regulator for neural crest cells, Hana Kim, Keunsoo Kang, Muhammad B. Ekram, Tae Young Roh, and Joomyeong Kim
Rex1/Zfp42 as an epigenetic regulator for genomic imprinting, Jeong Do Kim, Hana Kim, Muhammad B. Ekram, Sungryul Yu, Christopher Faulk, and Joomyeong Kim
Enhancing soil carbon storage for carbon remediation: Potential contributions and constraints by microbes, Gary M. King
Autoregulation of an RNA polymerase II promoter by the RNA polymerase III transcription factor III C (TFIIIC) complex, Richard A. Kleinschmidt, Kimberly E. LeBlanc, and David Donze
Status of GPCR modeling and docking as reflected by community-wide GPCR Dock 2010 assessment, Irina Kufareva, Manuel Rueda, Vsevolod Katritch, Raymond C. Stevens, Ruben Abagyan, Yasushi Yoshikawa, Toshio Furuya, Huisun Lee, Ambrish Roy, John Grime, et al.
Developing a community-based genetic nomenclature for anole lizards, Kenro Kusumi, Rob J. Kulathinal, Abzhanov, Stephane Boissinot, Nicholas G. Crawford, Brant C. Faircloth, Travis C. Glenn, Daniel E. Janes, Jonathan B. Losos, Douglas B. Menke, et al.
Iron-sulfur proteins are the major source of protein-bound dinitrosyl iron complexes formed in Escherichia coli cells under nitric oxide stress, Aaron P. Landry, Xuewu Duan, Hao Huang, and Huangen Ding
Assessment of Corticosterone Levels in American Alligators (Alligator mississippiensis) with Dermatitis, Christine Lattin
Elevated corticosterone in feathers correlates with corticosterone-induced decreased feather quality: A validation study, Christine R. Lattin, J. Michael Reed, David W. Desrochers, and L. Michael Romero
Arabidopsis RTNLB1 and RTNLB2 reticulon-like proteins regulate intracellular trafficking and activity of the FLS2 immune receptor, Hyoung Yool Lee, Christopher Hyde Bowen, George Viorel Popescu, Hong Gu Kang, Naohiro Kato, Shisong Ma, Savithramma Dinesh-Kumar, Michael Snyder, and Sorina Claudia Popescu
Invasion of a southeastern pine savanna by japanese climbing fern, Ellen R. Leichty, Becky J. Carmichael, and William J. Platt
Guidelines for HIV in court cases, T. Leitner
Analysis of free energy versus temperature curves in protein folding and macromolecular interactions, Vince J. LiCata and Chin Chi Liu
N-methylpurines are heterogeneously repaired in human mitochondria but not evidently repaired in yeast mitochondria, Shisheng Li
A genetically tagged Psb27 protein allows purification of two consecutive photosystem II (PSII) assembly intermediates in Synechocystis 6803, a cyanobacterium, Haijun Liu, Johnna L. Roose, Jeffrey C. Cameron, and Himadri B. Pakrasi
Comparative and demographic analysis of orang-utan genomes, Devin P. Locke, Ladeana W. Hillier, Wesley C. Warren, Kim C. Worley, Lynne V. Nazareth, Donna M. Muzny, Shiaw Pyng Yang, Zhengyuan Wang, Asif T. Chinwalla, Pat Minx, et al.
Environmentally persistent free radicals decrease cardiac function before and after ischemia/reperfusion injury in vivo, Kevin Lord, David Moll, John K. Lindsey, Sarah Mahne, Girija Raman, Tammy Dugas, Stephania Cormier, Dana Troxlair, Slawo Lomnicki, Barry Dellinger, et al.
Escherichia coli topoisomerase i is an iron and zinc binding protein, Jianxin Lu, Wu Wang, Guoqiang Tan, Aaron P. Landry, Peng Yi, Fan Si, Yaguang Ren, and Huangen Ding
Selection Response Decomposition (SRD): A New Tool for Dissecting Differences and Similarities Between Matrices, Gabriel Marroig, Diogo Melo, Arthur Porto, Harley Sebastião, and Guilherme Garcia
Plasticity of the reproductive axis caused by social status change in an african cichlid fish: II. Testicular gene expression and spermatogenesis, Karen P. Maruska and Russell D. Fernald
Social regulation of Gene Expression in the hypothalamic-pituitary-gonadal axis, Karen P. Maruska and Russell D. Fernald
Hormones and Reproduction in Chondrichthyan Fishes, Karen P. Maruska and James Gelsleichter
Plasticity of the reproductive axis caused by social status change in an african cichlid fish: I. Pituitary gonadotropins, Karen P. Maruska, Berta Levavi-Sivan, Jakob Biran, and Russell D. Fernald
Identification of a novel gene, CIA6, required for normal pyrenoid formation in chlamydomonas reinhardtii, Yunbing Ma, Steve V. Pollock, Ying Xiao, Khrishen Cunnusamy, and James V. Moroney
Role of pH in a nitric oxide-dependent increase in cytosolic Cl - in retinal amacrine cells, Emily McMains and Evanna Gleason
Expression and localization of CLC chloride transport proteins in the avian retina, Emily McMains, Vijai Krishnan, Sujitha Prasad, and Evanna Gleason
Mathematical modelling of negative feedback regulation by carboxyltransferase, Jr Meades, X. Cai, N. K. Thalji, G. L. Waldrop, and M. De Queiroz
Complete mitochondrial genome sequences of three Crocodylus species and their comparison within the Order Crocodylia, P. R. Meganathan, Bhawna Dubey, Mark A. Batzer, David A. Ray, and Ikramul Haque
Mapping copy number variation by population-scale genome sequencing, Ryan E. Mills, Klaudia Walter, Chip Stewart, Robert E. Handsaker, Ken Chen, Can Alkan, Alexej Abyzov, Seungtai Chris Yoon, Kai Ye, R. Keira Cheetham, et al.
The carbonic anhydrase isoforms of Chlamydomonas reinhardtii: Intracellular location, expression, and physiological roles, James V. Moroney, Yunbing Ma, Wesley D. Frey, Katelyn A. Fusilier, Trang T. Pham, Tiffany A. Simms, Robert J. DiMario, Jing Yang, and Bratati Mukherjee
Seed arrival and ecological filters interact to assemble high-diversity plant communities, Jonathan A. Myers and Kyle E. Harms
Recent synchronous radiation of a living fossil, N. S. Nagalingum, C. R. Marshall, T. B. Quental, H. S. Rai, D. P. Little, and S. Mathews
Arabidopsis Pht1;5 Mobilizes Phosphate between Source and Sink Organs and Influences the Interaction between Phosphate Homeostasis and Ethylene Signaling, Vinay K. Nagarajan, Ajay Jain, Michael D. Poling, Anthony J. Lewis, Kashchandra G. Raghothama, and Aaron P. Smith
Behavior of the ATP grasp domain of biotin carboxylase monomers and dimers studied using molecular dynamics simulations, Brian R. Novak, Dorel Moldovan, Grover L. Waldrop, and Marcio S. de Queiroz
Enhancing arabidopsis leaf growth by engineering the BRASSINOSTEROID INSENSITIVE1 receptor kinase, Man Ho Oh, Jindong Sun, Dong Ha Oh, Raymond E. Zielinski, Steven D. Clouse, and Steven C. Huber
Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA, Svetlana Pakhomova, Sue G. Bartlett, Pamela A. Doerner, and Marcia E. Newcomer
GeBP/GPL transcription factors regulate a subset of CPR5-dependent processes, Daniel Perazza, Frédéric Laporte, Claudine Balagué, Florian Chevalier, Shanterika Remo, Mickaël Bourge, John Larkin, Michel Herzog, and Gilles Vachon
MarR homologs with urate-binding signature, Inoka C. Perera and Anne Grove
Regulation of integrin αiIbβ3 ligand binding and signaling by the metal ion binding sites in the β i domain, Joel Raborn, Wei Wang, and Bing Hao Luo
Methods in Microbiology; Volume 38: Taxonomy of Prokaryotes, Fred Rainey
Reading TE leaves: New approaches to the identification of transposable element insertions, David A. Ray and Mark A. Batzer
Emerging roles of JAK-STAT signaling pathways in adipocytes, Allison J. Richard and Jacqueline M. Stephens
Nuclear versus mitochondrial DNA: Evidence for hybridization in colobine monkeys, Christian Roos, Dietmar Zinner, Laura S. Kubatko, Christiane Schwarz, Mouyu Yang, Dirk Meyer, Stephen D. Nash, Jinchuan Xing, Mark A. Batzer, Markus Brameier, et al.
Developmental defects in mutants of the PsbP domain protein 5 in Arabidopsis thaliana, Johnna L. Roose, Laurie K. Frankel, and Terry M. Bricker
Binding stoichiometry and affinity of the manganese-stabilizing protein affects redox reactions on the oxidizing side of photosystem II, Johnna L. Roose, Charles F. Yocum, and Hana Popelkova
Lack of the drosophila BEAF insulator proteins alters regulation of genes in the Antennapedia complex, Swarnava Roy, Nan Jiang, and Craig M. Hart
Altered gene expression and spongiotrophoblast differentiation in placenta from a mouse model of diabetes in pregnancy, J. M. Salbaum, C. Kruger, X. Zhang, N. Arbour Delahaye, G. Pavlinkova, D. H. Burk, and C. Kappen
Local adaptation in marine invertebrates, Eric Sanford and Morgan W. Kelly
Nucleotide sequence data confirm diagnosis and local endemism of variable morphospecies of Andean astroblepid catfishes (Siluriformes: Astroblepidae), Scott A. Schaefer, Prosanta Chakrabarty, Anthony J. Geneva, and Mark H. Sabaj Pérez
Structure-based development of small molecule PFKFB3 inhibitors: A framework for potential cancer therapeutic agents targeting the Warburg effect, Minsuh Seo, Jeong Do Kim, David Neau, Inder Sehgal, and Yong Hwan Lee
Arabidopsis pht1; 5 plays an integral role in phosphate homeostasis, Aaron P. Smith, Vinay K. Nagarajan, and Kashchandra G. Raghothama
Introduction by the Editors, Peter K. Smith and Craig H. Hart
The Wiley-Blackwell Handbook of Childhood Social Development: Second Edition, Peter K. Smith and Craig H. Hart
A comprehensive map of mobile element insertion polymorphisms in humans, Chip Stewart, Deniz Kural, Michael P. Strömberg, Jerilyn A. Walker, Miriam K. Konkel, Adrian M. Stütz, Alexander E. Urban, Fabian Grubert, Hugo Y.K. Lam, Wan Ping Lee, et al.