Submissions from 2007
Field studies of anoxic conditions in the Baltic Sea during the cruise of R/V Professor Albrecht Penck in July 2006, G. Jost, B. Clement, S. V. Pakhomova, and E. V. Yakushev
Retroposition and evolution of the DNA-binding motifs of YY1, YY2 and REX1, Jeong Do Kim, Christopher Faulk, and Joomyeong Kim
Genomic organization and imprinting of the Peg3 domain in bovine, Joomyeong Kim, Anne Bergmann, Jung Ha Choo, and Lisa Stubbs
A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase, Song Gun Kim, Michael Cavalier, M. Raafat El-Maghrabi, and Yong Hwan Lee
Ecophysiology of microbial respiration, Gary M. King
Microbial carbon monoxide consumption in salt marsh sediments, Gary M. King
Distribution, diversity and ecology of aerobic CO-oxidizing bacteria, Gary M. King and Carolyn F. Weber
Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris, Magnus Kjaergaard, Henrik Gårdsvoll, Daniel Hirschberg, Steen Nielbo, Anand Mayasundari, Cynthia B. Peterson, Anna Jansson, Thomas J.D. Jørgensen, Flemming M. Poulsen, and Michael Ploug
A new species of Ophiomegistus Banks (Acari: Paramegistidae) from Papua New Guinea, Hans Klompen and Christopher C. Austin
Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies, Miriam K. Konkel, Jianxin Wang, Ping Liang, and Mark A. Batzer
Catalytically Inactive Endoglycosidases as Microbial Diagnostic Reagents: Chitinases and Lysozymes as Fungal and Bacterial Capture/Label Agents, A. Roger Laine, W. C.Jennifer Lo, and C. R.Betty Zhu
Insights Into the Endocycle from Trichome Development, John C. Larkin, Matthew L. Brown, and Michelle L. Churchman
Habitat fragmentation, variable edge effects, and the landscape-divergence hypothesis, William F. Laurance, Henrique E.M. Nascimento, Susan G. Laurance, Ana Andrade, Robert M. Ewers, Kyle E. Harms, Regina C.C. Luizão, and José E. Ribeiro
Different evolutionary fates of recently integrated human and chimpanzee LINE-1 retrotransposons, Jungnam Lee, Richard Cordaux, Kyudong Han, Jianxin Wang, Dale J. Hedges, Ping Liang, and Mark A. Batzer
Cophylogeny and disparate rates of evolution in sympatric lineages of chewing lice on pocket gophers, Jessica E. Light and Mark S. Hafner
The roles of Rad16 and Rad26 in repairing repressed and actively transcribed genes in yeast, Shisheng Li, Baojin Ding, Danielle LeJeune, Christine Ruggiero, Xuefeng Chen, and Michael J. Smerdon
Functional analysis of photosystem II in a PsbO-1-deficient mutant in Arabidopsis thaliana, Haijun Liu, Laurie K. Frankel, and Terry M. Bricker
5-Methyltetrahydrofolate is bound in intersubunit areas of rat liver folate-binding protein glycine N-methyltransferase, Zigmund Luka, Svetlana Pakhomova, Lioudmila V. Loukachevitch, Martin Egli, Marcia E. Newcomer, and Conrad Wagner
Destabilization of human glycine N-methyltransferase by H176N mutation, Zigmund Luka, Svetlana Pakhomova, Yury Luka, Marcia E. Newcomer, and Conrad Wagner
Structural basis of integrin regulation and signaling, Bing Hao Luo, Christopher V. Carman, and Timothy A. Springer
Sex, seasonal, and stress-related variations in elasmobranch corticosterone concentrations, Charles A. Manire, L. E.L. Rasmussen, Karen P. Maruska, and Timothy C. Tricas
Sound production and spectral hearing sensitivity in the Hawaiian sergeant damselfish, Abudefduf abdominalis, Karen P. Maruska, Kelly S. Boyle, Laura R. Dewan, and Timothy C. Tricas
Sex and seasonal co-variation of arginine vasotocin (AVT) and gonadotropin-releasing hormone (GnRH) neurons in the brain of the halfspotted goby, Karen P. Maruska, Mindy H. Mizobe, and Timothy C. Tricas
Interspecific spawning between a recent immigrant and an endemic damselfish (Pisces: Pomacentridae) in the Hawaiian Islands, Karen P. Maruska and Kimberly A. Peyton
Gonadotropin-releasing hormone and receptor distributions in the visual processing regions of four coral reef fishes, Karen P. Maruska and Timothy C. Tricas
The herpes simplex virus UL20 protein functions in glycoprotein K (gK) intracellular transport and virus-induced cell fusion are independent of UL20 functions in cytoplasmic virion envelopment, Jeffrey M. Melancon, Preston A. Fulmer, and Konstantin G. Kousoulas
Caspase activity during cell stasis: Avoidance of apoptosis in an invertebrate extremophile, Artemia franciscana, Michael A. Menze and Steven C. Hand
The Chlamydomonas genome reveals the evolution of key animal and plant functions, Sabeeha S. Merchant, Simon E. Prochnik, Olivier Vallon, Elizabeth H. Harris, Steven J. Karpowicz, George B. Witman, Astrid Terry, Asaf Salamov, Lillian K. Fritz-Laylin, Laurence Maréchal-Drouard, et al.
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences, Tarjei S. Mikkelsen, Matthew J. Wakefield, Bronwen Aken, Chris T. Amemiya, Jean L. Chang, Shannon Duke, Manuel Garber, Andrew J. Gentles, Leo Goodstadt, Andreas Heger, et al.
Proposed carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii, James V. Moroney and Ruby A. Ynalvez
Improving protein crystal quality by selective removal of a Ca 2+-dependent membrane-insertion loop, David B. Neau, Nathaniel C. Gilbert, Sue G. Bartlett, Adam Dassey, and Marcia E. Newcomer
Five novel Candida species in insect-associated yeast clades isolated from Neuroptera and other insects, Nhu H. Nguyen, Sung-Oui Suh, and Meredith Blackwell
Disparate distributions of chemolithotrophs containing form IA or IC large subunit genes for ribulose-1,5-bisphosphate carboxylase/oxygenase in intertidal marine and littoral lake sediments, Lisa M. Nigro and Gary M. King
Highly specific olfactory receptor neurons for types of amino acids in the channel catfish, Alexander A. Nikonov and John Caprio
Responses of olfactory forebrain units to amino acids in the channel catfish, Alexander A. Nikonov and John Caprio
Sodium stress in the halophyte thellungiella halophila and transcriptional changes in a thsos1-RNA interference line, Dong Ha Oh, Qingqiu Gong, Alex Ulanov, Quan Zhang, Youzhi Li, Wenying Ma, Dae Jin Yun, Ray A. Bressan, and Hans J. Bohnert
Novel free ceramides as components of the soldier defense gland of the Formosan subterranean termite (Coptotermes formosanus), Masaya Ohta, Fumito Matsuura, Gregg Henderson, and Roger A. Laine
Fluxes of iron and manganese across the sediment-water interface under various redox conditions, Svetlana V. Pakhomova, Per O.J. Hall, Mikhail Yu Kononets, Alexander G. Rozanov, Anders Tengberg, and Andrei V. Vershinin
Novel plant-specific cyclin-dependent kinase inhibitors induced by biotic and abiotic stresses, Adrian Peres, Michelle L. Churchman, Srivaidehirani Hariharan, Kristiina Himanen, Aurine Verkest, Klaas Vandepoele, Zoltan Magyar, Yves Hatzfeld, Els Van Der Schueren, Gerrit T.S. Beemster, et al.
The need for proper vouchering in phylogenetic studies of birds, A. Townsend Peterson, Robert G. Moyle, Árpád S. Nyári, Mark B. Robbins, Robb T. Brumfield, and J. V. Remsen
Unidirectional Na+ and Ca2+ fluxes in two euryhaline teleost fishes, Fundulus heteroclitus and Oncorhynchus mykiss, acutely submitted to a progressive salinity increase, Viviane Prodocimo, Fernando Galvez, Carolina A. Freire, and Chris M. Wood
Deinococcus peraridilitoris sp. nov., isolated from a coastal desert, Fred A. Rainey, Margarida Ferreira, M Fernanda Nobre, Keren Ray, Danielle Bagaley, Ashlee M. Earl, John R. Battista, and Benito Gómez-Silva
Mobile element-based forensic genomics, David A. Ray, Jerilyn A. Walker, and Mark A. Batzer
Ancestral alleles and population origins: Inferences depend on mutation rate, Alan R. Rogers, Stephen Wooding, Chad D. Huff, Mark A. Batzer, and Lynn B. Jorde
The PsbQ protein defines cyanobacterial Photosystem II complexes with highest activity and stability, Johnna L. Roose, Yasuhiro Kashino, and Himadri B. Pakrasi
The extrinsic proteins of Photosystem II, Johnna L. Roose, Kimberly M. Wegener, and Himadri B. Pakrasi
Characterization of BEAF mutations isolated by homologous recombination in Drosophila, Swarnava Roy, Matthew K. Gilbert, and Craig M. Hart
A genetic screen supports a broad role for the Drosophila insulator proteins BEAF-32A and BEAF-32B in maintaining patterns of gene expression, Swarnava Roy, Yian Yee Tan, and Craig M. Hart
Characterization of polymorphic microsatellite loci for the invasive monk parakeet (Myiopsitta monachus), M. A. Russello, V. Saranathan, S. Buhrman-Deever, J. Eberhard, and A. Caccone
Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree, Jeffery M. Saarela, Hardeep S. Rai, James A. Doyle, Peter K. Endress, Sarah Mathews, Adam D. Marchant, Barbara G. Briggs, and Sean W. Graham
Distribution of the HIV resistance CCR5-Δ32 allele among Egyptians and Syrians, Abdel Halim Salem and Mark A. Batzer
Conformational control of selectivity in the dienone-phenol rearrangement, Anne M. Sauer, William E. Crowe, Gregg Henderson, and Roger A. Laine
Impact of the developmental appropriateness of teacher guidance strategies on kindergarten children’s interpersonal relations, Hardee M. Schmidt, Diane C. Burts, R. Sean Durham, Rosalind Charlesworth, and Craig H. Hart
Local influence of mitochondrial calcium transport in retinal amacrine cells, Madhumita Sen, Emily McMains, and Evanna Gleason
Endonuclease-independent insertion provides an alternative pathway for L1 retrotransposition in the human genome, Shurjo K. Sen, Charles T. Huang, Kyudong Han, and Mark A. Batzer
Tetranucleotide microsatellites from the loggerhead sea turtle (Caretta caretta), BRIAN M. SHAMBLIN, BRANT C. FAIRCLOTH, MARK DODD, ALICIA WOOD-JONES, STEVEN B. CASTLEBERRY, JOHN P. CARROLL, and C. JOSEPH NAIRN
Human genomic DNA quantitation system, H-Quant: Development and validation for use in forensic casework, Jaiprakash G. Shewale, Elaine Schneida, Jonathan Wilson, Jerilyn A. Walker, Mark A. Batzer, and Sudhir K. Sinha
Decoupling natural and anthropogenic fire regimes: A case study in Everglades National Park, Florida, Matthew G. Slocum, William J. Platt, Brian Beckage, Bob Panko, and James B. Lushine
Molecular phylogeny of the scincid lizards of New Caledonia and adjacent areas: Evidence for a single origin of the endemic skinks of Tasmantis, Sarah A. Smith, Ross A. Sadlier, Aaron M. Bauer, Christopher C. Austin, and Todd Jackman
A new species of ponyfish (Teleostei: Leiognathidae: Photoplagios) from the Philippines, John S. Sparks and Prosanta Chakrabarty
Calcium-dependent fast depolarizing afterpotentials in vasopressin neurons in the rat supraoptic nucleus, Ryoichi Teruyama and William E. Armstrong
Role of adiponectin and inflammation in insulin resistance of Mc3r and Mc4r knockout mice, James L. Trevaskis, Barbara Gawronska-Kozak, Gregory M. Sutton, Michele McNeil, Jacqueline M. Stephens, Steven R. Smith, and Andrew A. Butler
Enhanced electrogenerated chemiluminescence in the presence of fluorinated alcohols, David J. Vinyard and Mark M. Richter
Photoluminescence and electrogenerated chemiluminescence of a bis(bipyridyl)ruthenium(II)-porphyrin complex, David J. Vinyard, Shawn Swavey, and Mark M. Richter
Physiological, ecological, and phylogenetic characterization of Stappia, a marine CO-oxidizing bacterial genus, Carolyn F. Weber and Gary M. King
The STAT5A-mediated induction of pyruvate dehydrogenase kinase 4 expression by prolactin or growth hormone in adipocytes, Ursula A. White, Ann A. Coulter, Tiffany K. Miles, and Jacqueline M. Stephens
The African lungfish (Protopterus dolloi): Ionoregulation and osmoregulation in a fish out of water, Michael P. Wilkie, Tammie P. Morgan, Fernando Galvez, Richard W. Smith, Makiko Kajimura, Yuen K. Ip, and Chris M. Wood
Biology Intensive Orientation for Students (BIOS): A biology "boot camp", Sheri Maples Wischusen and E. William Wischusen
Genetic similarities within and between human populations, D. J. Witherspoon, S. Wooding, A. R. Rogers, E. E. Marchani, W. S. Watkins, M. A. Batzer, and L. B. Jorde
Relationships among ecologically important dimensions of plant trait variation in seven neotropical forests, Ian J. Wright, David D. Ackerly, Frans Bongers, Kyle E. Harms, Guillermo Ibarra-Manriquez, Miguel Martinez-Ramos, Susan J. Mazer, Helene C. Muller-Landau, Horacio Paz, Nigel C.A. Pitman, et al.
A mobile element-based evolutionary history of guenons (tribe Cercopithecini), Jinchuan Xing, Hui Wang, Yuhua Zhang, David A. Ray, Anthony J. Tosi, Todd R. Disotell, and Mark A. Batzer
Mobile DNA elements in primate and human evolution, Jinchuan Xing, David J. Witherspoon, David A. Ray, Mark A. Batzer, and Lynn B. Jorde
The PsbP protein is required for photosystem II complex assembly/stability and photoautotrophy in Arabidopsis thaliana, Xiaoping Yi, Stefan R. Hargett, Haijun Liu, Laurie K. Frankel, and Terry M. Bricker
Early response of alveolar macrophages to Respiratory Syncytial Virus infection, D. H. You, M. Ripple, T. Simms, and S. Cormier
Isolation of an osmotin-like protein gene from strawberry and analysis of the response of this gene to abiotic stresses, Yuhua Zhang and Ding S. Shih
Tests of the extension and deadbolt models of integrin activation, Jieqing Zhu, Brian Boylan, Bing Hao Luo, Peter J. Newman, and Timothy A. Springer
Requirement of α and β subunit transmembrane helix separation for integrin outside-in signaling, Jieqing Zhu, Christopher V. Carman, Minsoo Kim, Motomu Shimaoka, Timothy A. Springer, and Bing Hao Luo
Submissions from 2006
Parasites in a biodiversity hotspot: A survey of hematozoa and a molecular phylogenetic analysis of plasmodium in New Guinea skinks, Christopher C. Austin and Susan L. Perkins
Interactions between N- and C-terminal domains of the Saccharomyces cerevisiae high-mobility group protein HMO1 are required for DNA bending, Kevin T. Bauerle, Edwin Kamau, and Anne Grove
Geographic variation in clonal structure in a reef-building Caribbean coral, Acropora palmata, Iliana B. Baums, Margaret W. Miller, and Michael E. Hellberg
Modelling responses of pine savannas to climate change and large-scale disturbance, Brian Beckage, Louis J. Gross, and William J. Platt
Phylogeny of the parasitic plant family Orobanchaceae inferred from phytochrome A, Jonathan R. Bennett and Sarah Mathews
Phylogenetic and ecological determinants of the neotropical dawn chorus, Karl S. Berg, Robb T. Brumfield, and Victor Apanius
The structure of the carboxyltransferase component of acetyl-CoA carboxylase reveals a zinc-binding motif unique to the bacterial enzyme, Patrick Bilder, Sandra Lightle, Graeme Bainbridge, Jeffrey Ohren, Barry Finzel, Fang Sun, Susan Holley, Loola Al-Kassim, Cindy Spessard, Michael Melnick, et al.
Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha), Meredith Blackwell, David S. Hibbett, John W. Taylor, and Joseph W. Spatafora
The Crystal Structure of the Transcriptional Regulator HucR from Deinococcus radiodurans Reveals a Repressor Preconfigured for DNA Binding, Tee Bordelon, Steven P. Wilkinson, Anne Grove, and Marcia E. Newcomer
A time-resolved vibrational spectroscopy glimpse into the oxygen-evolving complex of photosynthesis, Terry M. Bricker
Electrogenerated chemiluminescence of (bis-bipyridyl)ruthenium(II) acetylacetonate complexes, Sean C. Brooks, David J. Vinyard, and Mark M. Richter
Disruption of cortical microtubules by overexpression of green fluorescent protein-tagged α-tubulin 6 causes a marked reduction in cell wall synthesis, David H. Burk, Ruiqin Zhong, W. Herbert Morrison, and Zheng Hua Ye
Systematics and historical biogeography of Greater Antillean Cichlidae, Prosanta Chakrabarty
Sequence variation in the coding region of the melanocortin-1 receptor gene (MC1R) is not associated with plumage variation in the blue-crowned manakin (Lepidothrix coronata), Z. A. Cheviron, Shannon J. Hackett, and Robb T. Brumfield
Allele-specific deposition of macroH2A1 in imprinting control regions, Jung Ha Choo, Jeong Do Kim, Jae Hoon Chung, Lisa Stubbs, and Joomyeong Kim
SIAMESE, a plant-specific cell cycle regulator, controls endoreplication onset in Arabidopsis thaliana, Michelle L. Churchman, Matthew L. Brown, Naohiro Kato, Viktor Kirik, Martin Hülskamp, Dirk Inzé, Lieven De Veylder, Jason D. Walker, Ui Zheng, David G. Oppenheimer, et al.
The importance of demographic niches to tree diversity, Richard Condit, Peter Ashton, Sarayudh Bunyavejchewin, H. S. Dattaraja, Stuart Davies, Shameema Esufali, Corneille Ewango, Robin Foster, I. A.U.N. Gunatilleke, C. V.S. Gunatilleke, et al.
Teaching an old dog new tricks: SINEs of canine genomic diversity, Richard Cordaux and Mark A. Batzer
Estimating the retrotransposition rate of human Alu elements, Richard Cordaux, Dale J. Hedges, Scott W. Herke, and Mark A. Batzer
Recently integrated Alu retrotransposons are essentially neutral residents of the human genome, Richard Cordaux, Jungnam Lee, Liv Dinoso, and Mark A. Batzer
Birth of a chimeric primate gene by capture of the transposase gene from a mobile element, Richard Cordaux, Swalpa Udit, Mark A. Batzer, and Cédric Feschotte
Origin and health impacts of emissions of toxic by-products and fine particles from combustion and thermal treatment of hazardous wastes and materials, Stephania A. Cormier, Slawo Lomnicki, Wayne Backes, and Barry Dellinger
Pivotal Advance: Eosinophil infiltration of solid tumors is an early and persistent inflammatory host response, Stephania A. Cormier, Anna G. Taranova, Carrie Bedient, Thanh Nguyen, Cheryl Protheroe, Ralph Pero, Dawn Dimina, Sergei I. Ochkur, Katie O'Neill, Dana Colbert, et al.