Submissions from 2018
Variation across mitochondrial gene trees provides evidence for systematic error: How much gene tree variation is biological?, Emilie J. Richards, Jeremy M. Brown, Anthony J. Barley, Rebecca A. Chong, and Robert C. Thomson
First Impressions-the Potential of Altering Initial Host-Virus Interactions for Rational Design of Herpesvirus Vaccine Vectors, Paul J. Rider, Farhana Musarrat, Rafiq Nabil, Shan Naidu, and Konstantin G. Kousoulas
Host and Symbionts in Pocillopora damicornis Larvae Display Different Transcriptomic Responses to Ocean Acidification and Warming, Emily B. Rivest, Morgan W. Kelly, Melissa B. DeBiasse, and Gretchen E. Hofmann
Multiple origins of green blood in New Guinea lizards, Zachary B. Rodriguez, Susan L. Perkins, and Christopher C. Austin
Cambial Phenology Informs Tree-Ring Analysis of Fire Seasonality in Coastal Plain Pine Savannas, Monica T. Rother, Jean M. Huffman, Grant L. Harley, William J. Platt, Neil Jones, Kevin M. Robertson, and Steve L. Orzell
Proximity ligation assay to study protein-protein interactions of proteins on two different cells, Rushikesh Sable, Nithya Jambunathan, Sitanshu Singh, Sandeep Pallerla, Konstantin G. Kousoulas, and Seetharama Jois
Isolation by distance, not incipient ecological speciation, explains genetic differentiation in an Andean songbird (Aves: Furnariidae: Cranioleuca antisiensis, Line-cheeked Spinetail) despite near threefold body size change across an environmental gradient, Glenn F. Seeholzer and Robb T. Brumfield
The Mediating Role of Korean Immigrant Mothers’ Psychological Well-Being in the Associations between Social Support and Authoritarian Parenting Style, You Jung Seo, Charissa S.L. Cheah, Sevgi Bayram Özdemir, Craig H. Hart, Christy Y.Y. Leung, and Shuyan Sun
Community assembly of the ferns of Florida, Emily B. Sessa, Sally M. Chambers, Daijiang Li, Lauren Trotta, Lorena Endara, J. Gordon Burleigh, and Benjamin Baiser
4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin, Shraddha Shrestha, Dong Ha Oh, J. Keller McKowen, Maheshi Dassanayake, and Craig M. Hart
Structural modification of the tripeptide KPV by reductive “glycoalkylation” of the lysine residue, Abigael C. Songok, Pradip Panta, William T. Doerrler, Megan A. Macnaughtan, and Carol M. Taylor
Optimizing photorespiration for improved crop productivity, Paul F. South, Amanda P. Cavanagh, Patricia E. Lopez-Calcagno, Christine A. Raines, and Donald R. Ort
Intramuscular vaccination of guinea pigs with the live-attenuated human herpes simplex vaccine VC2 stimulates a transcriptional profile of vaginal Th17 and regulatory Tr1 responses, Brent A. Stanfield, Paul J. Rider, John Caskey, Fabio Del Piero, and Konstantin G. Kousoulas
Perspective: Sistas In Science - Cracking the Glass Ceiling, Athena Starlard-Davenport, Alisa Rich, Titilope Fasipe, Eboni I. Lance, Kehinde Adekola, Ariadna Forray, Mesia Steed, and Ashley Fitzgerald
Analysis of lineage-specific Alu subfamilies in the genome of the olive baboon, Papio anubis, Cody J. Steely, Jasmine N. Baker, Jerilyn A. Walker, Charles D. Loupe, Mark A. Batzer, Jeffrey Rogers, R. Alan Harris, Muthuswamy Raveendran, Yue Liu, Shwetha Murali, et al.
Adipose Tissue Dysfunction Occurs Independently of Obesity in Adipocyte-Specific Oncostatin Receptor Knockout Mice, Jacqueline M. Stephens, Jennifer L. Bailey, Hardy Hang, Victoria Rittell, Marilyn A. Dietrich, Randall L. Mynatt, and Carrie M. Elks
Fibroblast growth factor 21, adiposity, and macronutrient balance in a healthy, pregnant population with overweight and obesity, Elizabeth F. Sutton, Christopher D. Morrison, Jacqueline M. Stephens, and Leanne M. Redman
Natively oxidized amino acid residues in the spinach cytochrome b6 f complex, Ryan M. Taylor, Larry Sallans, Laurie K. Frankel, and Terry M. Bricker
Misrepresentation of the Pennington Biomedical Research Center Weight Loss Predictor, Diana M. Thomas, Krista Watts, Jonathan Roginski, Corby K. Martin, Steven Heymsfield, Leanne M. Redman, and Dale A. Schoeller
Community phylogeny of the globally critically imperiled pine rockland ecosystem, Lauren B. Trotta, Benjamin Baiser, Jennifer Possley, Daijiang Li, James Lange, Sarah Martin, and Emily B. Sessa
Environmentally Persistent Free Radicals: Insights on a New Class of Pollutants, Eric P. Vejerano, Guiying Rao, Lavrent Khachatryan, Stephania A. Cormier, and Slawo Lomnicki
Why species delimitation matters for fungal ecology: Colletotrichum diversity on wild and cultivated cashew in Brazil, Josiene S. Veloso, Marcos P. Câmara, Waléria G. Lima, Sami J. Michereff, and Vinson P. Doyle
Desiccation tolerant lichens facilitate in vivo H/D isotope effect measurements in oxygenic photosynthesis, David J. Vinyard, Gennady M. Ananyev, and G. Charles Dismukes
REVISITING THE EVIDENCE FOR A PUNCTUATED MODE OF EVOLUTION IN METRARABDOTOS, Kjetil Lysne Voje, Emanuela Di Martino, and Arthur Porto
Elevated Periostin and NT-proBNP in Tracheal Aspirates Were Associated with Pulmonary Hypertension in Mechanically Ventilated Children with RSV Bronchiolitis, L. D. Vu, C. Ward, J. Devincenzo, R. Philip, S. A. Cormier, and D. Kimura
A Tale of Two Cycles, Kai Wang and John C. Larkin
The Absence of DHHC3 Affects Primary and Latent Herpes Simplex Virus 1 Infection, Shaohui Wang, Kevin R. Mott, Marianne Cilluffo, Casey L. Kilpatrick, Shoko Murakami, Alexander V. Ljubimov, Konstantin G. Kousoulas, and Sita Awasthi
Thioglycosides Are Efficient Metabolic Decoys of Glycosylation that Reduce Selectin Dependent Leukocyte Adhesion, Shuen Shiuan Wang, Xuefeng Gao, Virginia del Solar, Xinheng Yu, Aristotelis Antonopoulos, Alan E. Friedman, Eryn K. Matich, G. Ekin Atilla-Gokcumen, Mehrab Nasirikenari, Joseph T. Lau, et al.
PULMONARY HYPERTENSION IN INFANTS WITH RSV BRONCHIOLITIS IS NOT ASSOCIATED WITH VIRAL LOAD, C. Ward, D. Kimura, S. Cormier, and A. Saini
Cdk1-dependent phosphoinhibition of a formin-F-BAR interaction opposes cytokinetic contractile ring formation, Alaina H. Willet, K. Adam Bohnert, and Kathleen L. Gould
Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event, Kevin Winker, Travis C. Glenn, and Brant C. Faircloth
Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event, Kevin Winker, Travis C. Glenn, and Brant C. Faircloth
Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event, Kevin Winker, Travis C. Glenn, and Brant C. Faircloth
Transcriptomics reveal transgenerational effects in purple sea urchin embryos: Adult acclimation to upwelling conditions alters the response of their progeny to differential pCO2 levels, Juliet M. Wong, Kevin M. Johnson, Morgan W. Kelly, and Gretchen E Hofmann
3D MRI Modeling of Thin and Spatially Complex Soft Tissue Structures without Shrinkage: Lamprey Myosepta as an Example, Bradley M. Wood, Guang Jia, Owen Carmichael, Kevin Mcklveen, and Dominique G. Homberger
Fertilization influences the nutrient acquisition strategy of a nomadic vine in a lowland tropical forest understory, Carrie L. Woods, Saara J. DeWalt, Catherine L. Cardelús, Kyle E. Harms, Joseph B. Yavitt, and S. Joseph Wright
Plant responses to fertilization experiments in lowland, species-rich, tropical forests, S. Joseph Wright, Benjamin L. Turner, Joseph B. Yavitt, Kyle E. Harms, Michael Kaspari, Edmund V.J. Tanner, Jelena Bujan, Eric A. Griffin, Jordan R. Mayor, Sarah C. Pasquini, et al.
The 6xABRE synthetic promoter enables the spatiotemporal analysis of ABA-mediated transcriptional regulation, Rui Wu, Lina Duan, José L. Pruneda-Paz, Dong Ha Oh, Michael Pound, Steve Kay, and José R. Dinneny
Characterization of prostate cancer cell progression in zebrafish xenograft model, Wei Xu, Brittany A. Foster, Mackenzie Richards, Kenneth R. Bondioli, Girish Shah, and Christopher C. Green
Pol I DNA polymerases stimulate DNA end-joining by Escherichia coli DNA ligase, Yanling Yang and Vince J. LiCata
Preoptic leptin signaling modulates energy balance independent of body temperature regulation, Sangho Yu, Helia Cheng, Marie François, Emily Qualls-Creekmore, Clara Huesing, Yanlin He, Yanyan Jiang, Hong Gao, Yong Xu, Andrea Zsombok, et al.
Rice H2A.Z negatively regulates genes responsive to nutrient starvation but promotes expression of key housekeeping genes, Sara Zahraeifard, Maryam Foroozani, Aliasghar Sepehri, Dong Ha Oh, Guannan Wang, Venkata Mangu, Bin Chen, Niranjan Baisakh, Maheshi Dassanayake, and Aaron P. Smith
Rice nucleosome patterns undergo remodeling coincident with stress-induced gene expression, Qi Zhang, Dong Ha Oh, Sandra Feuer DiTusa, Mangu V. RamanaRao, Niranjan Baisakh, Maheshi Dassanayake, and Aaron P. Smith
Submissions from 2017
STAT5-Interacting proteins: A synopsis of proteins that regulate STAT5 activity, Ashley A. Able, Jasmine A. Burrell, and Jacqueline M. Stephens
Constructible sheaves on nilpotent cones in rather good characteristic, Pramod N. Achar, Anthony Henderson, Daniel Juteau, and Simon Riche
Modular generalized Springer correspondence II: Classical groups, Pramod N. Achar, Anthony Henderson, Daniel Juteau, and Simon Riche
Modular generalized Springer correspondence III: exceptional groups, Pramod N. Achar, Anthony Henderson, Daniel Juteau, and Simon Riche
Draft Genome Sequence of cf. , a Causal Agent of Cercospora Leaf Blight on Soybean, Sebastian Albu, Sandeep Sharma, Burton H. Bluhm, Paul P. Price, Raymond W. Schneider, and Vinson P. Doyle
Complete mitochondrial genomes of three Neotropical sleeper gobies: Eleotris amblyopsis, E. picta and Hemieleotris latifasciata (Gobiiformes: Eleotridae), Fernando Alda, Alexandria J. Adams, W. Owen McMillan, and Prosanta Chakrabarty
Biogeography of a plant invasion: drivers of latitudinal variation in enemy release, Warwick J. Allen, Laura A. Meyerson, David Cummings, John Anderson, Ganesh P. Bhattarai, and James T. Cronin
Operation Damage Control: Exercise Training to Prevent Metabolic Damage from High-Fat Feeding, Timothy D. Allerton and Jacqueline M. Stephens
The role of hydrophobic silane coating on Si stamps in nanoimprint lithography, Alborz Amirsadeghi, Lance Brumfield, Junseo Choi, Emily Brown, Jae Jong Lee, and Sunggook Park
Phylogeography and species delimitation in convict cichlids (Cichlidae: Amatitlania): Implications for taxonomy and Plio-Pleistocene evolutionary history in Central America, Justin C. Bagley, Wilfredo A. Matamoros, Caleb D. Mcmahan, Michael Tobler, Prosanta Chakrabarty, and Jerald B. Johnson
Evolution of Alu subfamily structure in the Saimiri lineage of new world monkeys, Jasmine N. Baker, Jerilyn A. Walker, John A. Vanchiere, Kacie R. Phillippe, Corey P. St Romain, Paulina Gonzalez-Quiroga, Michael W. Denham, Jackson R. Mierl, Miriam K. Konkel, and Mark A. Batzer
Longitudinal analysis of a diversity support program in biology: A national call for further assessment, Cissy J. Ballen and Nicholas A. Mason
Moving forward in circles: challenges and opportunities in modelling population cycles, Frédéric Barraquand, Stilianos Louca, Karen C. Abbott, Christina A. Cobbold, Flora Cordoleani, Donald L. DeAngelis, Bret D. Elderd, Jeremy W. Fox, Priscilla Greenwood, Frank M. Hilker, et al.
Evolution of Alu Subfamily Structure in the Saimiri Lineage of New World Monkeys, Mark Batzer, Jasmine N. Baker, Jerilyn A. Walker, John A. Vanchiere, Kacie R. Philippe, Corey P. St. Romain, Paulina Gonzalez-Quiroga, Michael W. Denham, Jackson R. Mierl, and Miriam K. Konkel
Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons, Mark Batzer, Cody J. Steely, Jerilyn A. Walker, Vallmer E. Jordan, Thomas O. Beckstrom, Cullen L. McDaniel, Corey P. St. Romain, Emily C. Bennett, Arianna Robichaux, Brooke N. Clement, et al.
Papio Baboon Species Indicative Alu Elements, Mark Batzer, Jerilyn A. Walker, Vallmer E. Jordan, Cody J. Steely, Thomas O. Beckstrom, Cullen L. McDaniel, Corey P. St. Romain, Emily C. Bennett, Arianna Robichaux, Brooke N. Clement, et al.
Mechanistic study of an improved Ni precatalyst for Suzuki-Miyaura reactions of aryl sulfamates: Understanding the role of Ni(I) species, Megan Mohadjer Beromi, Ainara Nova, David Balcells, Ann M. Brasacchio, Gary W. Brudvig, Louise M. Guard, Nilay Hazari, and David J. Vinyard
Biogeography of a plant invasion: Genetic variation and plasticity in latitudinal clines for traits related to herbivory, Ganesh P. Bhattarai, Laura A. Meyerson, Jack Anderson, David Cummings, Warwick J. Allen, and James T. Cronin
Geographic variation in apparent competition between native and invasive Phragmites australis, Ganesh P. Bhattarai, Laura A. Meyerson, and James T. Cronin
Made for Each Other: Ascomycete Yeasts and Insects, Meredith Blackwell
Multiple LHCII antennae can transfer energy efficiently to a single Photosystem I, Inge Bos, Kaitlyn M. Bland, Lijin Tian, Roberta Croce, Laurie K. Frankel, Herbert van Amerongen, Terry M. Bricker, and Emilie Wientjes
Lineage overwhelms environmental conditions in determining rhizosphere bacterial community structure in a cosmopolitan invasive plant, Jennifer L. Bowen, Patrick J. Kearns, Jarrett E.K. Byrnes, Sara Wigginton, Warwick J. Allen, Michael Greenwood, Khang Tran, Jennifer Yu, James T. Cronin, and Laura A. Meyerson
Phylogenomic Insights into the Evolution of Stinging Wasps and the Origins of Ants and Bees, Michael G. Branstetter, Bryan N. Danforth, James P. Pitts, Brant C. Faircloth, Philip S. Ward, Matthew L. Buffington, Michael W. Gates, and Robert R. Kula
Dry habitats were crucibles of domestication in the evolution of agriculture in ants, Michael G. Branstetter, Ana Ješovnik, Jeffrey Sosa-Calvo, Michael W. Lloyd, Brant C. Faircloth, Seán G. Brady, and Ted R. Schultz
Enriching the ant tree of life: enhanced UCE bait set for genome‐scale phylogenetics of ants and other Hymenoptera, Michael G. Branstetter, John T. Longino, Philip S. Ward, Brant C. Faircloth, and Samantha Price
The biogeography of sodium in Neotropical figs (Moraceae), Adriana Bravo and Kyle E. Harms
Transcription-driven DNA methylation setting on the mouse Peg3 locus, Corey L. Bretz and Joomyeong Kim
Epigenetic response of imprinted domains during carcinogenesis, Corey L. Bretz, Ingeborg M. Langohr, and Joomyeong Kim
Prolonged viral replication and longitudinal viral dynamic differences among respiratory syncytial virus infected infants, Monica E. Brint, Joshua M. Hughes, Aditya Shah, Chelsea R. Miller, Lisa G. Harrison, Elizabeth A. Meals, Jacqueline Blanch, Charlotte R. Thompson, Stephania A. Cormier, and John P. DeVincenzo
Bayes Factors Unmask Highly Variable Information Content, Bias, and Extreme Influence in Phylogenomic Analyses, Jeremy M. Brown and Robert C. Thomson
A model for the ergosterol biosynthetic pathway in Chlamydomonas reinhardtii, Kristy M. Brumfield, Susan M. Laborde, and James V. Moroney
Local alignment of ligand binding sites in proteins for polypharmacology and drug repositioning, Michal Brylinski
Resolving distinct molecular origins for copper effects on PAI-1, Joel C. Bucci, Carlee S. McClintock, Yuzhuo Chu, Gregory L. Ware, Kayla D. McConnell, Joseph P. Emerson, and Cynthia B. Peterson
Db / db Mice Exhibit Features of Human Type 2 Diabetes That Are Not Present in Weight-Matched C57BL/6J Mice Fed a Western Diet, Susan J. Burke, Heidi M. Batdorf, David H. Burk, Robert C. Noland, Adrianna E. Eder, Matthew S. Boulos, Michael D. Karlstad, and J. Jason Collier
Oral Corticosterone Administration Reduces Insulitis but Promotes Insulin Resistance and Hyperglycemia in Male Nonobese Diabetic Mice, Susan J. Burke, Heidi M. Batdorf, Adrianna E. Eder, Michael D. Karlstad, David H. Burk, Robert C. Noland, Z. Elizabeth Floyd, and J. Jason Collier
Swim bladder morphology changes with female reproductive state in the mouth-brooding African cichlid Astatotilapia burtoni, Julie M. Butler, Sarah M. Whitlow, Anwei P. Gwan, Prosanta Chakrabarty, and Karen P. Maruska
Parasite biodiversity faces extinction and redistribution in a changing climate, Colin J. Carlson, Kevin R. Burgio, Eric R. Dougherty, Anna J. Phillips, Veronica M. Bueno, Christopher F. Clements, Giovanni Castaldo, Tad A. Dallas, Carrie A. Cizauskas, Graeme S. Cumming, et al.
Biosynthesis of Sulfur-Containing tRNA Modifications: A Comparison of Bacterial, Archaeal, and Eukaryotic Pathways, Mirela Čavužić and Yuchen Liu
Phylogenomic Systematics of Ostariophysan Fishes: Ultraconserved Elements Support the Surprising Non-Monophyly of Characiformes, Prosanta Chakrabarty, Brant C. Faircloth, Fernando Alda, William B. Ludt, Caleb D. Mcmahan, Thomas J. Near, Alex Dornburg, and James S. Albert
Binding of nitric oxide in CDGSH-type [2Fe-2S] clusters of the human mitochondrial protein miner2, Zishuo Cheng, Aaron P. Landry, Yiming Wang, and Huangen Ding
Syntheses and PDT activity of new mono- and di-conjugated derivatives of chlorin e, Hui Chen, Stewart W. Humble, R G. Waruna Jinadasa, Zehua Zhou, Alex L. Nguyen, M Graça Vicente, and Kevin M. Smith
Caenorhabditis elegans RIG-I homolog mediates antiviral RNA interference downstream of Dicer-dependent biogenesis of viral small interfering RNAs, Stephanie R. Coffman, Jinfeng Lu, Xunyang Guo, Jing Zhong, Hongshan Jiang, Gina Broitman-Maduro, Wan Xiang Li, Rui Lu, Morris Maduro, and Shou Wei Ding
Intramyocellular Lipid Droplet Size Rather Than Total Lipid Content is Related to Insulin Sensitivity After 8 Weeks of Overfeeding, Jeffrey D. Covington, Darcy L. Johannsen, Paul M. Coen, David H. Burk, Diana N. Obanda, Philip J. Ebenezer, Charmaine S. Tam, Bret H. Goodpaster, Eric Ravussin, and Sudip Bajpeyi
Crystal structure of heart 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB2) and the inhibitory influence of citrate on substrate binding, Robert B. Crochet, Jeong Do Kim, Herie Lee, Young Sun Yim, Song Gun Kim, David Neau, and Yong Hwan Lee
Costs of reproduction and carry-over effects in breeding albatrosses, Glenn T. Crossin, Richard A. Phillips, Christine R. Lattin, L. Michael Romero, Xavier Bordeleau, Christopher M. Harris, Oliver P. Love, and Tony D. Williams
Species are not most abundant in the centre of their geographic range or climatic niche, Tad Dallas, Robin R. Decker, and Alan Hastings
Estimating parasite host range, Tad Dallas, Shan Huang, Charles Nunn, Andrew W. Park, and John M. Drake
Predictability of helminth parasite host range using information on geography, host traits and parasite community structure, Tad Dallas, Andrew W. Park, and John M. Drake
Predicting cryptic links in host-parasite networks, Tad Dallas, Andrew W. Park, and John M. Drake
Making plants break a sweat: The structure, function, and evolution of plant salt glands, Maheshi Dassanayake and John C. Larkin
Shoreline oiling effects and recovery of salt marsh macroinvertebrates from the Oil Spill, Donald R. Deis, John W. Fleeger, Stefan M. Bourgoin, Irving A. Mendelssohn, Qianxin Lin, and Aixin Hou
MarR family transcription factors: dynamic variations on a common scaffold, Dinesh K. Deochand and Anne Grove
Plant Carbonic Anhydrases: Structures, Locations, Evolution, and Physiological Roles, Robert J. DiMario, Harmony Clayton, Ananya Mukherjee, Martha Ludwig, and James V. Moroney
Biomarkers of Aryl-hydrocarbon Receptor Activity in Gulf Killifish (Fundulus grandis) From Northern Gulf of Mexico Marshes Following the Deepwater Horizon Oil Spill, Benjamin Dubansky, Charles D. Rice, Lester F. Barrois, and Fernando Galvez
Cryptic Female Choice Revisited: A Response to Firman et al, William G. Eberhard
Cosmopolitan species as models for ecophysiological responses to global change: The common reed phragmites australis, Franziska Eller, Hana Skálová, Joshua S. Caplan, Ganesh P. Bhattarai, Melissa K. Burger, James T. Cronin, Wen Yong Guo, Xiao Guo, Eric L.G. Hazelton, Karin M. Kettenring, et al.
Investigating Difficult Nodes in the Placental Mammal Tree with Expanded Taxon Sampling and Thousands of Ultraconserved Elements, Jacob A. Esselstyn, Carl H. Oliveros, Mark T. Swanson, and Brant C. Faircloth