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Submissions from 2003

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Mobile element-based assay for human gender determination, Dale J. Hedges, Jerilyn A. Walker, Pauline A. Callinan, Jaiprakash G. Shewale, Sudhir K. Sinha, and Mark A. Batzer

STAT 1 binds to the LPL promoter in vitro, Jessica C. Hogan and Jacqueline M. Stephens

Avian origins revisited, Dominique G. Homberger

The Role of Mechanical Forces on the Patterning of the Avian Feather-Bearing Skin: A Biomechanical Analysis of the Integumentary Musculature in Birds, Dominique G. Homberger and Kumudini N. De Silva

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Global conformations, hydrodynamics, and x-ray scattering properties of Taq and Escherichia coli DNA polymerases in solution, Allison M. Joubert, Angela S. Byrd, and Vince J. LiCata

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Comparative thermal denaturation of Thermus aquaticus and Escherichia coli type 1 DNA polymerases, Irene Karantzeni, Carmen Ruiz, Chin Chi Liu, and Vince J. Licata

Structural analyses of living plant nuclei., Naohiro Kato

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Chromatin of endoreduplicated pavement cells has greater range of movement than that of diploid guard cells in Arabidopsis thaliana, Naohiro Kato and Eric Lam

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Y chromosome STR haplotypes and the genetic structures of U.S. populations of African, European, and Hispanic ancestry, Manfred Kayser, Silke Brauer, Hiltrud Schädlich, Mechthild Prinz, Mark A. Batzer, Peter A. Zimmerman, B. A. Boatin, and Mark Stoneking

Cloning and partial characterization of a beta-1,3-glucanase gene from strawberry, Anwar A. Khan, Yanlin Shi, and Ding S. Shih

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Methylation-sensitive binding of transcription factor YY1 to an insulator sequence within the paternally expressed imprinted gene, Peg3, Joomyeong Kim, Angela Kollhoff, Anne Bergmann, and Lisa Stubbs

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Contributions of atmospheric CO and hydrogen uptake to microbial dynamics on recent Hawaiian volcanic deposits, Gary M. King

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Molecular and Culture-Based Analyses of Aerobic Carbon Monoxide Oxidizer Diversity, Gary M. King

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Uptake of Carbon Monoxide and Hydrogen at Environmentally Relevant Concentrations by Mycobacteria, Gary M. King

Disturbance history influences regeneration of non-pioneer understory trees, Charles Kwit and William J. Platt

How Do Cells Know What They Want to be When They Grow Up? Lessons from Epidermal Patterning in Arabidopsis, John C. Larkin, Matt L. Brown, and John Schiefelbein

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Tissue-specific structure/function differentiation of the liver isoform of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, Yong Hwan Lee, Yang Li, Kosaku Uyeda, and Charles A. Hasemann

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Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein, Yong Hwan Lee, Shorena Nadaraia, Dan Gu, Donald F. Becker, and John J. Tanner

Photosynthate distribution patterns in cherrybark oak seedling sprouts, Brian Roy Lockhart, John D. Hodges, Emile S. Gardiner, and Andrew W. Ezell

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High affinity ligand binding by integrins does not involve head separation, Bing Hao Luo, Timothy A. Springer, and Junichi Takagi

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Stabilizing the open conformation of the integrin headpiece with a glycan wedge increases affinity for ligand, Bing Hao Luo, Timothy A. Springer, and Junichi Takagi

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High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance, Rui Lu, Isabelle Malcuit, Peter Moffett, Maria T. Ruiz, Jack Peart, Ai Jiuan Wu, John P. Rathjen, Abdelhafid Bendahmane, Louise Day, and David C. Baulcombe

Virus-induced gene silencing in plants, Rui Lu, Ana Montserrat Martin-Hernandez, Jack R. Peart, Isabelle Malcuit, and David C. Baulcombe

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Allelic Heterogeneity in LINE-1 Retrotransposition Activity, Sheila M. Lutz, Bethaney J. Vincent, Haig H. Kazazian, Mark A. Batzer, and John V. Moran

Bioavailability of desorption-resistant phenanthrene to the oligochaete Ilyodrilus templetoni, Xiaoxia Lu, Danny D. Reible, John W. Fleeger, and Yunzhou Chai

Comparative effects of vetiver oil, nootkatone and disodium octaborate tetrahydrate on Coptotermes formosanus and its symbiotic fauna, Lara Maistrello, Gregg Henderson, and Roger A. Laine

Brain-Metastatic Melanoma: A Neurotrophic Perspective, Dario Marchetti, Yvonne Denkins, Jane Reiland, Andrea Greiter-Wilke, Jennifer Galjour, Brian Murry, Jason Blust, and Madhuchhanda Roy

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Inhibition of heparanase activity and heparanase-induced angiogenesis by suramin analogues, Dario Marchetti, Jane Reiland, Brad Erwin, and Madhuchhanda Roy

Cryptic species, cryptic endosymbionts, and geographical variation in chemical defences in the bryozoan Bugula neritina, Tamara M. McGovern and Michael E. Hellberg

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Incremented alkyl derivatives enhance collision induced glycosidic bond cleavage in mass spectrometry of disaccharides, Sanford Mendonca, Richard B. Cole, Junhua Zhu, Yang Cai, Alfred D. French, Glenn P. Johnson, and Roger A. Laine

Regulation of PPARγ and obesity by agouti/melanocortin signaling in adipocytes, Randall L. Mynatt and Jacqueline M. Stephens

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Methods for estimating long-distance dispersal, Ran Nathan, Gad Perry, James T. Cronin, Allan E. Strand, and Michael L. Cain

Field evaluation of nootkatone and tetrahydronootkatone as wood treatments against Coptotermes formosanus, K.E. Nix, G. Henderson, and R.A. Laine

Expression of an evolutionarily distinct novel BiP gene during the unfolded protein response in Arabidopsis thaliana, Seung Jae Noh, Chang Seob Kwon, Dong Ha Oh, Jae Sun Moon, and Won Il Chung

Characterization of a male-predominant antisense transcript underexpressed in hybrids of Drosophila pseudoobscura and D. persimilis, Mohamed A. Noor, Pawel Michalak, and David Donze

Conservation between animals and plants of the cis-acting element involved in the unfolded protein response, D.-H. Oh, C.-S. Kwon, H. Sano, W.-I. Chung, and N. Koizumi

Deletion and site-specific mutagenesis of nucleolin's carboxy GAR domain, Gregory J. Pellar and Patrick J. DiMario

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Rubisco Activase Is Required for Optimal Photosynthesis in the Green Alga Chlamydomonas reinhardtii in a Low-CO2 Atmosphere, Steve V. Pollock, Sergio L. Colombo, Davey L. Prout, Ashley C. Godfrey, and James V. Moroney

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Localization and characterization of phenamil-sensitive Na+ influx in isolated rainbow trout gill epithelial cells, Scott D. Reid, G. S. Hawkings, F. Galvez, and G. G. Goss

Reversible inactivation of E. coli endonuclease III via modification of its [4Fe-4S] cluster by nitric oxide, P.A. Rogers, L. Eide, A. Klungland, and H. Ding

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Children's sociable and aggressive behaviour with peers: A comparison of the US and Australia, and contributions of temperament and parenting styles, Alan Russell, Craig H. Hart, Clyde C. Robinson, and Susanne F. Olsen

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Recently integrated Alu elements and human genomic diversity, Abdel Halim Salem, Gail E. Kilroy, W. Scott Watkins, Lynn B. Jorde, and Mark A. Batzer

LINE-1 preTa elements in the human genome, Abdel Halim Salem, Jeremy S. Myers, Anthony C. Otieno, W Scott Watkins, Lynn B. Jorde, and Mark A. Batzer

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Alu elements and hominid phylogenetics, Abdel Halim Salem, David A. Ray, Jinchuan Xing, Pauline A. Callinan, Jeremy S. Myers, Dale J. Hedges, Randall K. Garber, David J. Witherspoon, Lynn B. Jorde, and Mark A. Batzer

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Salt modulates the stability and lipid binding affinity of the adipocyte lipid-binding protein, Allyn J. Schoeffler, Carmen R. Ruiz, Allison M. Joubert, Xuemei Yang, and Vince J. LiCata

Separate and coordinate transcriptional control mechanisms link expression of the potentially lethal KilB spread locus to the upstream transmission operon on Streptomyces plasmid pIJ101, Kevin L. Schully and Gregg S. Pettis

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A causative relationship exists between eosinophils and the development of allergic pulmonary pathologies in the mouse, Hua Hao H. Shen, Sergei I. Ochkur, Michael P. McGarry, Jeffrey R. Crosby, Edie M. Hines, Michael T. Borchers, Huiying Wang, Travis L. Biechelle, Katie R. O'Neill, Tracy L. Ansay, et al.

Pressure effects on the GTPase activity of brain membrane G proteins of deep-living marine fishes, Joseph F. Siebenaller

Erratum: Mitochondrial DNA variation among host races of Eurosta solidaginis fitch (Diptera: Tephritidae) (Molecular Phylogenetics and Evolution (2002) 25 (372-376)), Paul T. Smith, Kimberly Krager, James T. Cronin, and Srini Kambhampati

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Agouti Expression in Human Adipose Tissue: Functional Consequences and Increased Expression in Type 2 Diabetes, Steven R. Smith, Barbara Gawronska-Kozak, Lenka Janderová, Taylor Nguyen, Angela Murrel, Jacqueline M. Stephens, and Randall L. Mynatt

Wood ingestion by passalid beetles in the presence of xylose-fermenting gut yeasts, Sung-Oui Suh, Christopher J. Marshall, Joseph V. McHugh, and Meredith Blackwell

Genetic evidence for local retention of pelagic larvae in a Caribbean reef fish, Michael S. Taylor and Michael E. Hellberg

Floral ontogeny in Swartzia (Leguminosae: Papilionoideae: Swartzieae): distribution and role of the ring meristem, Shirley C. Tucker

Phylogenetic evaluation of Xylothamia, Gundlachia, and related genera (Asteraceae, Astereae) based on ETS and ITS nrDNA sequence data, Lowell E. Urbatsch, Roland P. Roberts, and Vesna Karaman

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Following the LINEs: An analysis of primate genomic variation at human-specific LINE-1 insertion sites, Bethaney J. Vincent, Jeremy S. Myers, Huei Jin Ho, Gail E. Kilroy, Jerilyn A. Walker, W. Scott Watkins, Lynn B. Jorde, and Mark A. Batzer

Quantitative intra-short interspersed element PCR for species-specific DNA identification, Jerilyn A. Walker, David A. Hughes, Bridget A. Anders, Jaiprakash Shewale, Sudhir K. Sinha, and Mark A. Batzer

Human DNA quantitation using Alu element-based polymerase chain reaction, Jerilyn A. Walker, Gail E. Kilroy, Jinchuan Xing, Jaiprakash Shewale, Sudhir K. Sinha, and Mark A. Batzer

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Genetic variation among world populations: Inferences from 100 Alu insertion polymorphisms, W. Scott Watkins, Alan R. Rogers, Christopher T. Ostler, Steve Wooding, Michael J. Bamshad, Anna Marie E. Brassington, Marion L. Carroll, Son V. Nguyen, Jerilyn A. Walker, B. V.Ravi Prasad, et al.

Catalase in microsporidian spores before and during discharge, Earl Weidner and Ann Findley

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The effect of density-dependent catastrophes on population persistence time, Chris Wilcox and Bret Elderd

The endangered species act petitioning process: Successes and failures, C. V. Wilcox and B. D. Elderd

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Evidence that acetyl phosphate functions as a global signal during biofilm development, Alan J. Wolfe, Dong Eun Chang, Jason D. Walker, Jeanine E. Seitz-Partridge, Michael D. Vidaurri, Charles F. Lange, Birgit M. Prüß, Margaret C. Henk, John C. Larkin, and Tyrrell Conway

Comprehensive analysis of two Alu Yd subfamilies, Jinchuan Xing, Abdel-Halim Salem, Dale J. Hedges, Gail E. Kilroy, W Scott Watkins, John E. Schienman, Caro-Beth Stewart, Jerzy Jurka, Lynn B. Jorde, and Mark A. Batzer

Microorganisms in the gut of beetles: evidence from molecular cloning, Ning Zhang, Sung-Oui Suh, and Meredith Blackwell

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Interstrain inhibition in the sweet potato pathogen Streptomyces ipomoeae: Purification and characterization of a highly specific bacteriocin and cloning of its structural gene, Xiujun Zhang, Christopher A. Clark, and Gregg S. Pettis

Repellency of Vetiver Oils from Different Biogenetic and Geographical Origins against Formosan Subterranean Termites (Isoptera: Rhinotermitidae), B.C.-R. Zhu, G. Henderson, R.P. Adams, L. Mao, Y. Yu, and R.A. Laine

Terpene-induced morphological changes to exoskeleton of Formosan subterranean termites (Isoptera: Rhinotermitidae): Toxic effects of cis-nerol, B.C.R. Zhu, G. Henderson, H. Fei, X. Ying, and R.A. Laine

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Haplotypes in the Dystrophin DNA Segment Point to a Mosaic Origin of Modern Human Diversity, Ewa Ziȩtkiewicz, Vania Yotova, Dominik Gehl, Tina Wambach, Isabel Arrieta, Mark Batzer, David E.C. Cole, Peter Hechtman, Feige Kaplan, David Modiano, et al.

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The regulation and activation of ciliary neurotrophic factor signaling proteins in adipocytes, Sanjin Zvonic, Peter Cornelius, William C. Stewart, Randall L. Mynatt, and Jacqueline M. Stephens

Growth hormone, but not insulin, activates STAT5 proteins in adipocytes in vitro and in vivo, Sanjin Zvonic, David J. Story, Jacqueline M. Stephens, and Randall L. Mynatt

Submissions from 2002

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Local systems on nilpotent orbits and weighted dynkin diagrams, Pramod N. Achar and Eric N. Sommers

Protective immunity against lethal HSV-1 challenge in mice by nucleic acid-based immunisation with herpes simplex virus type-1 genes specifying glycoproteins gB and gD, Abolghasem Baghian, Vladimir N. Chouljenko, Oswald D'Auvergne, Mark J. Newman, Salman Baghian, and Konstantin G. Kousoulas

Hydrocarbon effects on fouling assemblages: the importance of taxonomic differences, seasonal, and tidal variation, Patrick D. Banks and Kenneth M. Brown

Alu repeats and human genomic diversity, Mark A. Batzer and Prescott L. Deininger

The structure and function of CP47 and CP43 in Photosystem II, Terry M. Bricker and Laurie K. Frankel

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Introduction of the 305Arg→305Ser mutation in the large extrinsic loop E of the CP43 protein of Synechocystis sp. PCC 6803 leads to the loss of cytochrome c550 binding to Photosystem II, Terry M. Bricker, Andrew Young, Laurie K. Frankel, and Cindy Putnam-Evans

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Alteration of oriented deposition of cellulose microfibrils by mutation of a katanin-like microtubule-severing protein, David H. Burk and Zheng Hua Ye

Role of Ser530, Arg292, and His662 in the allosteric behavior of rabbit muscle phosphofructokinase, Simon H. Chang and Robert G. Kemp

Use of the bleomycin resistance gene to generate tagged insertional mutants of Chlamydomonas reinhardtii that require elevated CO2 for optimal growth, Sergio L. Colombo, Steve V. Pollock, Karla A. Eger, Ashley C. Godfrey, James E. Adams, Catherine B. Mason, and James V. Moroney

T(H)2-mediated pulmonary inflammation leads to the differential expression of ribonuclease genes by alveolar macrophages, S. A. Cormier, S. B. Yuan, J. R. Crosby, C. A. Protheroe, D. M. Dimina, E. M. Hines, N. A. Lee, and J. J. Lee

Th2 mediated pulmonary inflammation induces the differential expression of a unique eosinophil-associated ribonuclease gene, S. A. Cormier, S. B. Yuan, D. Dimina, N. A. Lee, and J. J. Lee

Multi-subunit acetyl-CoA carboxylases, John E. Cronan and Grover L. Waldrop

Identification of a multicopy chromatin boundary element at the borders of silenced chromosomal domains, Olivier Cuvier, Craig M. Hart, Emmanuel Käs, and Ulrich K. Laemmli

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Phylogeny of Acridocarpus-Brachylophon (Malpighiaceae): Implications for tertiary tropical floras and afroasian biogeography, Charles C. Davis, Charles D. Bell, Peter W. Fritsch, and Sarah Mathews

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Laurasian migration explains Gondwanan disjunctions: Evidence from Malpighiaceae, Charles C. Davis, Charles D. Bell, Sarah Mathews, and Michael J. Donoghue

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Mammalian retroelements, Prescott L. Deininger and Mark A. Batzer

Escherichia coli SoxR protein: Sensor/transducer of oxidative stress and nitric oxide, B. Demple, H. Ding, and M. Jorgensen

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ATPase activity of the MsbA lipid flippase of Escherichia coli, William T. Doerrler and Christian R.H. Raetz

Braking the silence: How heterochromatic gene repression is stopped in its tracks, David Donze and Rohinton T. Kamakaka

The IrrE protein of Deinococcus radiodurans R1 is a novel regulator of recA expression, Ashlee M. Earl, Michael M. Mohundro, I Saira Mian, and John R. Battista

Genetic evidence that the uvsE gene product of Deinococcus radiodurans R1 is a UV damage endonuclease, Ashlee M. Earl, Sara K. Rankin, Kwang-Pyo Kim, Oleana N. Lamendola, and John R. Battista

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Interferon-γ-mediated activation and ubiquitin-proteasome-dependent degradation of PPARγ in adipocytes, Z. Elizabeth Floyd and Jacqueline M. Stephens

Nucleolin is a calcium-binding protein, James S.C. Gilchrist, Bernard Abrenica, Patrick J. Dimario, Michael P. Czubryt, and Grant N. Pierce

Marking the start site of RNA polymerase III transcription: The role of constraint, compaction and continuity of the transcribed DNA strand, A. Grove, M.S. Adessa, E.P. Geiduschek, and G.A. Kassavetis

The role of surface-exposed lysines in wrapping DNA about the bacterial histone-like protein HU, A. Grove and T.C. Saavedra

The functional morphology of the pectoral fin girdle of the spiny dogfish (Squalus acanthias): Implications for the evolutionary history of the pectoral girdle of vertebrates, Michael Gudo and Dominique G. Homberger

Genetic analysis of sexual reproduction in the dendrophylliid coral Balanophyllia elegans, M. E. Hellberg and M. S. Taylor

Genetic assessment of connectivity among marine populations, Michael E. Hellberg, Ronald S. Burton, Joseph E. Neigel, and Stephen R. Palumbi

Activation of mGluR5 modulates GABA(A) receptor function in retinal amacrine cells, Brian K. Hoffpauir and Evanna L. Gleason

Effects of DNA strand breaks on transcription by RNA polymerase III: Insights into the role of TFIIIB and the polarity of promoter opening, G.A. Kassavetis, A. Grove, and E.P. Geiduschek