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Submissions from 2022

Functional trait data for vascular plant species from northeastern North America, Donald M. Waller, Alison K. Paulson, Jeannine H. Richards, William S. Alverson, Kathryn L. Amatangelo, Chengke Bai, Sarah E. Johnson, Daijiang Li, Grégory Sonnier, and Rachel H. Toczydlowski

Arabidopsis plastid carbonic anhydrase βCA5 is important for normal plant growth, Hiruni N. Weerasooriya, Robert J. DiMario, Viviana C. Rosati, Ashwani K. Rai, Lillian M. LaPlace, Victoria D. Filloon, David J. Longstreth, and James V. Moroney

Arabidopsis plastid carbonic anhydrase βCA5 is important for normal plant growth, Hiruni N. Weerasooriya, Robert J. DiMario, Viviana C. Rosati, Ashwani K. Rai, Lillian M. LaPlace, Victoria D. Filloon, David J. Longstreth, and James V. Moroney

Arabidopsis plastid carbonic anhydrase βCA5 is important for normal plant growth, Hiruni N. Weerasooriya, Robert J. DiMario, Viviana C. Rosati, Ashwani K. Rai, Lillian M. LaPlace, Victoria D. Filloon, David J. Longstreth, and James V. Moroney

Arabidopsis plastid carbonic anhydrase βCA5 is important for normal plant growth, Hiruni N. Weerasooriya, Robert J. DiMario, Viviana C. Rosati, Ashwani K. Rai, Lillian M. LaPlace, Victoria D. Filloon, David J. Longstreth, and James V. Moroney

The Spraguea Parasitism in Anglerfishes of the Genus Lophius, Earl Weidner

Microsporidia Have a Peculiar Outer Membrane with Exterior Cytoplasmic Proteins, Earl Weidner and Robin Overstreet

Short-Term Exposure to Thermophilic Temperatures Facilitates CO Uptake by Thermophiles Maintained under Predominantly Mesophilic Conditions, Caitlin K. Wilson and Gary M. King

Phylogenomic analysis of the bowfin (Amia calva) reveals unrecognized species diversity in a living fossil lineage, Jeremy J. Wright, Spencer A. Bruce, Daniel A. Sinopoli, Jay R. Palumbo, and Donald J. Stewart

Multiple Domains of Staphylococcal Superantigen-like Protein 11 (SSL11) Contribute to Neutrophil Inhibition, Chen Yang, Joseph T. Barbieri, Nancy M. Dahms, and Chen Chen

Notch signaling pathway: a comprehensive prognostic and gene expression profile analysis in breast cancer, Hassan Yousefi, Afshin Bahramy, Narges Zafari, Mahsa Rostamian Delavar, Khoa Nguyen, Atousa Haghi, Tahmineh Kandelouei, and Cecilia Vittori

Hippo signaling pathway: A comprehensive gene expression profile analysis in breast cancer, Hassan Yousefi, Mahsa Rostamian Delavar, Fatemeh Piroozian, Masoud Baghi, Khoa Nguyen, Thomas Cheng, Cecilia Vittori, and David Worthylake

Meta-analysis of salt marsh vegetation impacts and recovery: a synthesis following the Deepwater Horizon oil spill, Scott Zengel, Jennifer Weaver, Irving A. Mendelssohn, Sean A. Graham, Qianxin Lin, Mark W. Hester, Jonathan M. Willis, and Brian R. Silliman

Automated landmarking via multiple templates, Chi Zhang, Arthur Porto, Sara Rolfe, Altan Kocatulum, and A Murat Maga

Exploring Conflicts in Whole Genome Phylogenetics: A Case Study within Manakins (Aves: Pipridae), Min Zhao, Sarah M. Kurtis, Noor D. White, Andre E. Moncrieff, Rafael N. Leite, Robb T. Brumfield, Edward L. Braun, and Rebecca T. Kimball

Impacts of global change on the phyllosphere microbiome, Yong-Guan Zhu, Chao Xiong, Zhong Wei, Qing-Lin Chen, Bin Ma, Shu-Yi-Dan Zhou, Jiaqi Tan, and Li-Mei Zhang

Submissions from 2021

Prospects for beyond the Standard Model physics searches at the Deep Underground Neutrino Experiment: DUNE Collaboration, B Abi, R Acciarri, M A. Acero, G Adamov, D Adams, M Adinolfi, Z Ahmad, and J Ahmed

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Comparing Ultraconserved Elements and Exons for Phylogenomic Analyses of Middle American Cichlids: When Data Agree to Disagree, Fernando Alda, William B. Ludt, Diego J. Elías, Caleb D. McMahan, and Prosanta Chakrabarty

An Ethanolic Extract of Artemisia dracunculus L. Enhances the Metabolic Benefits of Exercise in Diet-induced Obese Mice, Timothy D. Allerton, Greg M. Kowalski, James Stampley, Brian A. Irving, John R. Lighton, Z Elizabeth Floyd, and Jacqueline M. Stephens

Exercise reduced the formation of new adipocytes in the adipose tissue of mice in vivo, Timothy D. Allerton, Jonathan J. Savoie, Mark D. Fitch, Marc K. Hellerstein, Jacqueline M. Stephens, and Ursula White

Transgenic expression of late embryogenesis abundant proteins improves tolerance to water stress in, John M. Anderson and Steven C. Hand

Limited plasticity in thermally tolerant ectotherm populations: evidence for a trade-off, Jordanna M. Barley, Brian S. Cheng, Matthew Sasaki, Sarah Gignoux-Wolfsohn, Cynthia G. Hays, Alysha B. Putnam, Seema Sheth, Andrew R. Villeneuve, and Morgan Kelly

Climate drivers of adult insect activity are conditioned by life history traits, Michael W. Belitz, Vijay Barve, Joshua R. Doby, Maggie M. Hantak, Elise A. Larsen, Daijiang Li, Jessica A. Oswald, Neeka Sewnath, Mitchell Walters, Narayani Barve, et al.

Gut-brain communication and obesity: understanding functions of the vagus nerve, Hans-Rudolf Berthoud, Vance L. Albaugh, and Winfried L. Neuhuber

Optimized Methodology for Reference Region and Image-Derived Input Function Kinetic Modeling in Preclinical PET, Jason Bini, Christine R. Lattin, Takuya Toyonaga, Sjoerd J. Finnema, and Richard E. Carson

and Metabolic Health: Untapped Potential of an Ancient Remedy for Modern Use, Anik Boudreau, Allison J. Richard, Innocence Harvey, and Jacqueline M. Stephens

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Phylogenomic Analyses Reveal Non-Monophyly Of The Antbird Genera Herpsilochmus And Sakesphorus (Thamnophilidae), With Description Of A New Genus For Herpsilochmus Sellowi, G A. Bravo, B M. Whitney, R Belmonte-Lopes, M R. Bornschein, G A. Bravo, R Beco, J Battilana, L N. Naka, A Aleixo, M R. Pie, et al.

Analyzing a phenological anomaly in Yucca of the southwestern United States, Laura Brenskelle, Vijay Barve, Lucas C. Majure, Rob P. Guralnick, and Daijiang Li

A Role for Adipocytes and Adipose Stem Cells in the Breast Tumor Microenvironment and Regenerative Medicine, Courtney K. Brock, Katherine L. Hebert, Maria Artiles, Maryl K. Wright, Thomas Cheng, Gabrielle O. Windsor, Khoa Nguyen, and Madlin S. Alzoubi

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Multiple Species And Deep Genomic Divergences Despite Little Phenotypic Differentiation In An Ancient Neotropical Songbird, Tunchiornis Ochraceiceps (Sclater, 1860) (Aves: Vireonidae), N Buainain, M F. Maximiano, M Ferreira, A Aleixo, N Buainain, R T. Brumfield, J Cracraft, and C C. Ribas

The critical importance of vouchers in genomics, Janet C. Buckner, Robert C. Sanders, Brant C. Faircloth, and Prosanta Chakrabarty

The critical importance of vouchers in genomics, Janet C. Buckner, Robert C. Sanders, Brant C. Faircloth, and Prosanta Chakrabarty

Genome assemblies for two Neotropical trees: Jacaranda copaia and Handroanthus guayacan, John T. Burley, James R. Kellner, Stephen P. Hubbell, Brant C. Faircloth, and R K. Dawe

KAT8, lysine acetyltransferase 8, is required for adipocyte differentiation in vitro, Jasmine A. Burrell and Jacqueline M. Stephens

Noise during mouthbrooding impairs maternal care behaviors and juvenile development and alters brain transcriptomes in the African cichlid fish Astatotilapia burtoni, Julie M. Butler and Karen P. Maruska

Opsin Expression Varies with Reproductive State in the Cichlid Fish Astatotilapia burtoni, Julie M. Butler and Karen P. Maruska

Organelle-Specific Autophagy in Cellular Aging and Rejuvenation, Tyler J. Butsch, Bhaswati Ghosh, and K Adam Bohnert

Deeply Altered Genome Architecture in the Endoparasitic Flowering Plant Sapria himalayana Griff. (Rafflesiaceae), Liming Cai, Brian J. Arnold, Zhenxiang Xi, Danielle E. Khost, Niki Patel, Claire B. Hartmann, Sugumaran Manickam, and Sawitree Sasirat

Conservation status of the world's skinks (Scincidae): Taxonomic and geographic patterns in extinction risk, David G. Chapple, Uri Roll, Monika Böhm, Rocío Aguilar, Andrew P. Amey, Chris C. Austin, Marleen Baling, Anthony J. Barley, Michael F. Bates, Aaron M. Bauer, et al.

Reduced turnaround times through multi-sectoral community collaboration during the first surge of SARS-CoV-2 and associated effect on patient care and hospital operations, Rebecca C. Christofferson, Hollis R. O'Neal, Tonya Jagneaux, Catherine O'Neal, Christine S. Walsh, E Handly Mayton, Luan D. Vu, and Abigail I. Fish

Isoform-specific roles of the Drosophila filamin-type protein Jitterbug (Jbug) during development, SeYeon Chung, Thao Phuong Le, Vishakha Vishwakarma, Yim Ling Cheng, and Deborah J. Andrew

Dissecting molecular details and functional effects of the high-affinity copper binding site in plasminogen activator Inhibitor-1, Yuzhuo Chu, Joel C. Bucci, and Cynthia B. Peterson

Pancreatic, but not myeloid-cell, expression of interleukin-1alpha is required for maintenance of insulin secretion and whole body glucose homeostasis, J Jason Collier, Heidi M. Batdorf, Thomas M. Martin, Kristen E. Rohli, David H. Burk, Danhong Lu, Chris R. Cooley, and Michael D. Karlstad

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Bats And Humans During Thesars-Cov-2Outbreak: The Case Of Bat-Coronaviruses From Mexico, P Colunga-Salas and G Hernandez-Canchola

to Explore Nucleolar Stress, Kathryn R. DeLeo, Sonu S. Baral, Alex Houser, Allison James, Phelan Sewell, Shova Pandey, and Patrick J. DiMario

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Anaerobic carbon monoxide uptake by microbial communities in volcanic deposits at different stages of successional development on o‐yama volcano, Miyake‐jima, Japan, Amber N. Depoy, Gary M. King, and Hiroyuki Ohta

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Degradative Tubular Lysosomes Link Pexophagy To Starvation And Early Aging In C. Elegans, D A. Dolese, M P. Junot, B Ghosh, T J. Butsch, D A. Dolese, and K A. Bohnert

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Beyond DNA: The rest of the story, Gregg Duncan, Yongsheng Ji, Marie Caroline Lefort, Ruty Mehrian-Shai, Prosanta Chakrabarty, and Maria Fernanda Torres Jimenez

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A reporting format for leaf-level gas exchange data and metadata, Kim S. Ely, Alistair Rogers, Deborah A. Agarwal, Elizabeth A. Ainsworth, Loren P. Albert, Ashehad Ali, Jeremiah Anderson, Michael J. Aspinwall, Chandra Bellasio, Carl Bernacchi, et al.

A Role for Exercise to Counter Skeletal Muscle Clock Disruption, Melissa L. Erickson, Karyn A. Esser, William E. Kraus, Thomas W. Buford, and Leanne M. Redman

Maternal metabolic health drives mesenchymal stem cell metabolism and infant fat mass at birth, Melissa L. Erickson, Zachary W. Patinkin, Allison M. Duensing, Dana Dabelea, Leanne M. Redman, and Kristen E. Boyle

Positive Selection and Heat-Response Transcriptomes Reveal Adaptive Features of the Brassicaceae Desert Model, Anastatica hierochuntica, Gil Eshel, Nick Duppen, Guannan Wang, Dong-Ha Oh, Yana Kazachkova, Pawel Herzyk, Anna Amtmann, Michal Gordon, Vered Chalifa-Caspi, Michelle Arland Oscar, et al.

Surf and turf vision: Patterns and predictors of visual acuity in compound eye evolution, Kathryn D. Feller, Camilla R. Sharkey, Alyssa McDuffee-Altekruse, Heather D. Bracken-Grissom, Nathan P. Lord, Megan L. Porter, and Lorian E. Schweikert

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Author Correction: Dense sampling of bird diversity increases power of comparative genomics (Nature, (2020), 587, 7833, (252-257), 10.1038/s41586-020-2873-9), Shaohong Feng, Josefin Stiller, Yuan Deng, Joel Armstrong, Qi Fang, Andrew Hart Reeve, Duo Xie, Guangji Chen, Chunxue Guo, Brant C. Faircloth, et al.

H3K4 trimethylation dynamics impact diverse developmental and environmental responses in plants, Maryam Foroozani, Matthew P. Vandal, and Aaron P. Smith

More-curated Data Outperforms More Data: Treatment of Cryptic and Known Paralogs Improves Phylogenomic Analysis and Resolves a Northern Andean Origin of Freziera (Pentaphylacaceae), Laura Frost and Laura Lagomarsino

A supergene underlies linked variation in color and morphology in a Holarctic songbird, Erik R. Funk, Nicholas A. Mason, Snæbjörn Pálsson, Tomáš Albrecht, Jeff A. Johnson, and Scott A. Taylor

, sp. nov., is an emerging root-associated pathogen responsible for taproot decline of soybean in the southern United States, Teddy Garcia-Aroca, Paul P. Price, Maria Tomaso-Peterson, Tom W. Allen, Tessie H. Wilkerson, Terry N. Spurlock, Travis R. Faske, and Burt Bluhm

Elongation factor ELOF1 drives transcription-coupled repair and prevents genome instability, Marit E. Geijer, Di Zhou, Kathiresan Selvam, Barbara Steurer, Chirantani Mukherjee, Bastiaan Evers, Simona Cugusi, and Marvin van Toorn

Publisher Correction: Elongation factor ELOF1 drives transcription-coupled repair and prevents genome instability, Marit E. Geijer, Di Zhou, Kathiresan Selvam, Barbara Steurer, Chirantani Mukherjee, Bastiaan Evers, Simona Cugusi, and Marvin van Toorn

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous, Ava Ghezelayagh, Richard C. Harrington, Edward D. Burress, Matthew A. Campbell, Janet C. Buckner, Prosanta Chakrabarty, Jessica R. Glass, W. Tyler McCraney, Peter J. Unmack, Christine E. Thacker, et al.

PEG3 controls lipogenesis through ACLY, Subash Ghimire, Juan J. Loor, and Joomyeong Kim

Maternal cold exposure induces distinct transcriptome changes in the placenta and fetal brown adipose tissue in mice, Sujoy Ghosh, Chul-Hong Park, Jisu Lee, Nathan Lee, Rui Zhang, Clara Huesing, Dorien Reijnders, and Jennifer Sones

Untangling the web of 5-lipoxygenase-derived products from a molecular and structural perspective: The battle between pro- and anti-inflammatory lipid mediators, Nathaniel C. Gilbert, Marcia E. Newcomer, and Oliver Werz

Preen gland microbiota of songbirds differ across populations but not sexes, Leanne A. Grieves, Gregory B. Gloor, Tosha R. Kelly, Mark A. Bernards, and Elizabeth A. MacDougall-Shackleton

Evolutionary Change in the Eastern Oyster, Crassostrea Virginica, Following Low Salinity Exposure, Joanna S. Griffiths, Kevin M. Johnson, and Morgan W. Kelly

Transgenerational plasticity and the capacity to adapt to low salinity in the eastern oyster, Crassostrea virginica, Joanna S. Griffiths, Kevin M. Johnson, Kyle A. Sirovy, Mark S. Yeats, Francis T. C. Pan, Jerome F. La Peyre, and Morgan W. Kelly

An Experimental Test of Adaptive Introgression in Locally Adapted Populations of Splash Pool Copepods, Joanna S. Griffiths, Yasmeen Kawji, Morgan W. Kelly, and Wilson Melissa

Expression patterns and evolution of urocortin and corticotropin‐releasing hormone genes in a cichlid fish, Brian P. Grone, Julie M. Butler, Christy R. Wayne, and Karen P. Maruska

Developmental Hazard of Environmentally Persistent Free Radicals and Protective Effect of TEMPOL in Zebrafish Model, Xia Guan, Lisa Truong, Slawomir M. Lomnicki, Robert L. Tanguay or Robyn L. Tanguay, and Stephania Cormier

Laboulbeniomycetes: Intimate Fungal Associates of Arthropods, Danny Haelewaters, Meredith Blackwell, and Donald H. Pfister

Could diffuse coevolution explain the generic eggshell color of the brown-headed cowbird?, Daniel Hanley, Beheshteh Moghaddame-Jafari, and Samantha L. Rutledge

Mammalian body size is determined by interactions between climate, urbanization, and ecological traits, Maggie M. Hantak, Bryan S. McLean, Daijiang Li, and Robert P. Guralnick

Artemisia scoparia promotes adipogenesis in the absence of adipogenic effectors, Innocence Harvey and Jacqueline M. Stephens

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A Reference Genome For The Nectar-Robbing Black-Throated Flowerpiercer (Diglossa Brunneiventris), A E. Hiller, R T. Brumfield, and B C. Faircloth

A reference genome for the nectar-robbing Black-throated Flowerpiercer (Diglossa brunneiventris), Anna E. Hiller, Robb T. Brumfield, Brant C. Faircloth, and A Sethuraman

Phylogenomics Reveals Ancient Gene Tree Discordance In The Amphibian Tree Of Life, P M. Hime, A R. Lemmon, E C. Lemmon, E Prendini, P M. Hime, R C. Thomson, J D. Kratovil, B P. Noonan, R A. Pyron, P L. Peloso, et al.

Combined Effects Of A Ketogenic Diet And Exercise Training Alter Mitochondrial And Peroxisomal Substrate Oxidative Capacity In Skeletal Muscle, T Y. Huang, M A. Linden, S E. Fuller, F R. Goldsmith, T Y. Huang, H M. Batdorf, M C. Scott, N M. Essajee, J M. Brown, and R C. Noland

Morphological integration during postnatal ontogeny: Implications for evolutionary biology, A. Hubbe, G. Garcia, H. Sebastião, A. Porto, F. Machado, J. Cheverud, and G. Marroig

Hitching a Ride: Examining the Ability of a Specialist Baculovirus to Translocate through Its Insect Host’s Food Plant, Peter Issa, Michael Garvey, Scott Grimmell, Pramod Pantha, Maheshi Dassanayake, and Bret Elderd

Hitching a Ride: Examining the Ability of a Specialist Baculovirus to Translocate through Its Insect Host’s Food Plant, Peter P. Issa, Michael Garvey, Scott Grimmell, Pramod Pantha, Maheshi Dassanayake, and Bret D. Elderd

Two Sides to Every Story: Herpes Simplex Type-1 Viral Glycoproteins gB, gD, gH/gL, gK, and Cellular Receptors Function as Key Players in Membrane Fusion, Nithya Jambunathan, Carolyn M. Clark, Farhana Musarrat, Vladimir N. Chouljenko, Jared Rudd, and Konstantin G. Kousoulas

SVIP is a molecular determinant of lysosomal dynamic stability, neurodegeneration and lifespan, Alyssa E. Johnson, Brian O. Orr, Richard D. Fetter, Armen J. Moughamian, Logan A. Primeaux, Ethan G. Geier, Jennifer S. Yokoyama, and Bruce L. Miller

Transcriptomic signatures of temperature adaptation in the eastern oyster Crassostrea virginica, Kevin M. Johnson, Hollis R. Jones, Sandra M. Casas, Jerome F. La Peyre, and Morgan W. Kelly

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Systematics of a Neotropical clade of dead-leaf-foraging antwrens (Aves: Thamnophilidae; Epinecrophylla), Oscar Johnson, Jeffrey T. Howard, and Robb T. Brumfield

Subcellular Localizations of Catalase and Exogenously Added Fatty Acid in Chlamydomonas reinhardtii, Naohiro Kato, Gabela Nelson, and Kyle J. Lauersen

A Diagnostic TaqMan Real-Time PCR Assay for In Planta Detection and Quantification of , Causal Agent of Boxwood Dieback, Harleen Kaur, Raghuwinder Singh, Vinson Doyle, and Rodrigo Valverde

Selection Experiments in the Sea: What Can Experimental Evolution Tell Us About How Marine Life Will Respond to Climate Change?, Morgan W. Kelly and Joanna S. Griffiths

Evidence for thermosensitivity of the cotton (Gossypium hirsutum L.) immature fiber (im) mutant via hypersensitive stomatal activity, Hee Jin Kim, Frances Sussmilch, Naohiro Kato, Ruth Ndathe, Gregory N. Thyssen, Don C. Jones, and Harish H. Ratnayaka

Genetic screen for suppressors of increased silencing in rpd3 mutants in Saccharomyces cerevisiae identifies a potential role for H3K4 methylation, Richard A. Kleinschmidt, Laurie M. Lyon, Samantha L. Smith, Jonah Rittenberry, K Maeve Lawless, Anabelle A. Acosta, David Donze, and J Rine

Tocopherol controls D1 amino acid oxidation by oxygen radicals in Photosystem II, Aditya Kumar, Ankush Prasad, Michaela Sedlářová, Ravindra Kale, Laurie K. Frankel, Larry Sallans, Terry M. Bricker, and Pavel Pospíšil

Exposure to combustion derived particulate matter exacerbates influenza infection in neonatal mice by inhibiting IL22 production, Avinash Kumar, Vivek S. Patel, Jeffrey N. Harding, Dahui You, and Stephania A. Cormier

Professor Sen-itiroh Hakomori (1929-2020): A tribute to a remarkable glycobiologist, mentor and friend!, Roger A. Laine, Carl G. Gahmberg, Kiyotoshi Sekiguchi, Reiji Kannagi, Stephen D. Anderson, Edward D. Nudelman, and Henrik Clausen

Constitutive gene expression differs in three brain regions important for cognition in neophobic and non-neophobic house sparrows (Passer domesticus), Christine R. Lattin, Tosha R. Kelly, Morgan W. Kelly, and Kevin M. Johnson

Constitutive gene expression differs in three brain regions important for cognition in neophobic and non-neophobic house sparrows (Passer domesticus), Christine R. Lattin, Tosha R. Kelly, Morgan W. Kelly, and Kevin M. Johnson

Target enzymes are stabilized by AfrLEA6 and a gain of α-helix coincides with protection by a group 3 LEA protein during incremental drying, Blase M. LeBlanc and Steven C. Hand

Phylogenomics of manakins (Aves: Pipridae) using alternative locus filtering strategies based on informativeness, Rafael N. Leite, Rebecca T. Kimball, Edward L. Braun, Elizabeth P. Derryberry, Peter A. Hosner, Graham E. Derryberry, Marina Anciães, Jessica S. McKay, Alexandre Aleixo, Camila C. Ribas, et al.

Regulation of apical constriction via microtubule- and Rab11-dependent apical transport during tissue invagination, Thao Phuong Le and SeYeon Chung

Climate, urbanization, and species traits interactively drive flowering duration, Daijiang Li, Narayani Barve, Laura Brenskelle, Kamala Earl, Vijay Barve, Michael W. Belitz, Joshua Doby, Maggie M. Hantak, Jessica A. Oswald, Brian J. Stucky, et al.

Standardized NEON organismal data for biodiversity research, Daijiang Li, Sydne Record, Eric Sokol, Matthew E. Bitters, Melissa Y. Chen, Anny Y. Chung, Matthew R. Helmus, Ruvi Jaimes, Lara Jansen, Marta A. Jarzyna, et al.