Title
A disorder to order transition accompanies catalysis in retinaldehyde dehydrogenase type II
Document Type
Article
Publication Date
10-8-2004
Abstract
Retinaldehyde dehydrogenase II (RalDH2) converts retinal to the transcriptional regulator retinoic acid in the developing embryo. The x-ray structure of the enzyme revealed an important structural difference between this protein and other aldehyde dehydrogenases of the same enzyme superfamily; a 20-amino acid span in the substrate access channel in retinaldehyde dehydrogenase II is disordered, whereas in other aldehyde dehydrogenases this region forms a well defined wall of the substrate access channel. We asked whether this disordered loop might order during the course of catalysis and provide a means for an enzyme that requires a large substrate access channel to restrict access to the catalytic machinery by smaller compounds that might potentially enter the active site and be metabolized. Our experiments, a combination of kinetic, spectroscopic, and crystallographic techniques, suggest that a disorder to order transition is linked to catalytic activity.
Publication Source (Journal or Book title)
The Journal of biological chemistry
First Page
43085
Last Page
91
Recommended Citation
Bordelon, T., Montegudo, S. K., Pakhomova, S., Oldham, M. L., & Newcomer, M. E. (2004). A disorder to order transition accompanies catalysis in retinaldehyde dehydrogenase type II. The Journal of biological chemistry, 279 (41), 43085-91. https://doi.org/10.1074/jbc.M406139200